Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
ZC3H6P61129 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.74■■■□□ 2.51
ZC3H6P61129 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
ZC3H6P61129 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
ZC3H6P61129 AC004911.1-201ENST00000416316 871 ntBASIC30.74■■■□□ 2.51
ZC3H6P61129 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ZC3H6P61129 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
ZC3H6P61129 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
ZC3H6P61129 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ZC3H6P61129 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ZC3H6P61129 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ZC3H6P61129 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.73■■■□□ 2.51
ZC3H6P61129 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.73■■■□□ 2.51
ZC3H6P61129 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.73■■■□□ 2.51
ZC3H6P61129 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC30.73■■■□□ 2.51
ZC3H6P61129 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
ZC3H6P61129 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ZC3H6P61129 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
ZC3H6P61129 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ZC3H6P61129 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.73■■■□□ 2.51
ZC3H6P61129 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
ZC3H6P61129 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.72■■■□□ 2.51
ZC3H6P61129 MIR6089-201ENST00000616698 64 ntBASIC30.72■■■□□ 2.51
ZC3H6P61129 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H6P61129 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H6P61129 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.72■■■□□ 2.51
ZC3H6P61129 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H6P61129 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H6P61129 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H6P61129 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.72■■■□□ 2.51
ZC3H6P61129 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
ZC3H6P61129 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
ZC3H6P61129 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ZC3H6P61129 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
ZC3H6P61129 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.71■■■□□ 2.51
ZC3H6P61129 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZC3H6P61129 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ZC3H6P61129 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.7■■■□□ 2.51
ZC3H6P61129 MIR6084-201ENST00000622012 110 ntBASIC30.7■■■□□ 2.51
ZC3H6P61129 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.7■■■□□ 2.5
ZC3H6P61129 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.69■■■□□ 2.5
ZC3H6P61129 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
ZC3H6P61129 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.69■■■□□ 2.5
ZC3H6P61129 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.69■■■□□ 2.5
ZC3H6P61129 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.68■■■□□ 2.5
ZC3H6P61129 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H6P61129 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H6P61129 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H6P61129 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H6P61129 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H6P61129 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.68■■■□□ 2.5
ZC3H6P61129 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ZC3H6P61129 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ZC3H6P61129 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.67■■■□□ 2.5
ZC3H6P61129 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.67■■■□□ 2.5
ZC3H6P61129 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.67■■■□□ 2.5
ZC3H6P61129 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.66■■■□□ 2.5
ZC3H6P61129 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.66■■■□□ 2.5
ZC3H6P61129 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZC3H6P61129 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.66■■■□□ 2.5
ZC3H6P61129 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC30.66■■■□□ 2.5
ZC3H6P61129 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
ZC3H6P61129 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZC3H6P61129 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
ZC3H6P61129 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ZC3H6P61129 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ZC3H6P61129 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ZC3H6P61129 AC027612.3-201ENST00000413684 1047 ntBASIC30.65■■■□□ 2.5
ZC3H6P61129 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ZC3H6P61129 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.65■■■□□ 2.5
ZC3H6P61129 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC30.65■■■□□ 2.5
ZC3H6P61129 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
ZC3H6P61129 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ZC3H6P61129 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ZC3H6P61129 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
ZC3H6P61129 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
ZC3H6P61129 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.63■■■□□ 2.49
ZC3H6P61129 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
ZC3H6P61129 AC123595.1-201ENST00000440769 1046 ntBASIC30.63■■■□□ 2.49
ZC3H6P61129 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.63■■■□□ 2.49
ZC3H6P61129 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
ZC3H6P61129 AL358852.1-201ENST00000623174 1268 ntBASIC30.63■■■□□ 2.49
ZC3H6P61129 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZC3H6P61129 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ZC3H6P61129 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.62■■■□□ 2.49
ZC3H6P61129 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.62■■■□□ 2.49
ZC3H6P61129 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.62■■■□□ 2.49
ZC3H6P61129 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.61■■■□□ 2.49
ZC3H6P61129 ID1-201ENST00000376105 1233 ntBASIC30.61■■■□□ 2.49
ZC3H6P61129 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ZC3H6P61129 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ZC3H6P61129 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZC3H6P61129 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZC3H6P61129 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.6■■■□□ 2.49
ZC3H6P61129 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ZC3H6P61129 CCDC92B-201ENST00000575506 885 ntBASIC30.6■■■□□ 2.49
ZC3H6P61129 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.6■■■□□ 2.49
ZC3H6P61129 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
ZC3H6P61129 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
ZC3H6P61129 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms