Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4CP60510 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.15■■□□□ 1.94
PPP4CP60510 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4CP60510 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.15■■□□□ 1.94
PPP4CP60510 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4CP60510 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
PPP4CP60510 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.14■■□□□ 1.94
PPP4CP60510 AC142381.2-201ENST00000566120 298 ntBASIC27.14■■□□□ 1.94
PPP4CP60510 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.14■■□□□ 1.94
PPP4CP60510 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PPP4CP60510 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PPP4CP60510 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4CP60510 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.13■■□□□ 1.93
PPP4CP60510 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4CP60510 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4CP60510 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.13■■□□□ 1.93
PPP4CP60510 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4CP60510 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4CP60510 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4CP60510 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4CP60510 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.12■■□□□ 1.93
PPP4CP60510 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
PPP4CP60510 MIR935-201ENST00000401179 91 ntBASIC27.12■■□□□ 1.93
PPP4CP60510 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.12■■□□□ 1.93
PPP4CP60510 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.12■■□□□ 1.93
PPP4CP60510 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.12■■□□□ 1.93
PPP4CP60510 AC011298.3-201ENST00000615796 283 ntBASIC27.12■■□□□ 1.93
PPP4CP60510 AL136967.2-201ENST00000623968 743 ntBASIC27.12■■□□□ 1.93
PPP4CP60510 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4CP60510 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4CP60510 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4CP60510 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4CP60510 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4CP60510 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.11■■□□□ 1.93
PPP4CP60510 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.11■■□□□ 1.93
PPP4CP60510 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.11■■□□□ 1.93
PPP4CP60510 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.11■■□□□ 1.93
PPP4CP60510 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
PPP4CP60510 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4CP60510 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.11■■□□□ 1.93
PPP4CP60510 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4CP60510 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
PPP4CP60510 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4CP60510 AC006455.2-201ENST00000429931 906 ntBASIC27.1■■□□□ 1.93
PPP4CP60510 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.1■■□□□ 1.93
PPP4CP60510 MIR4767-201ENST00000582827 78 ntBASIC27.1■■□□□ 1.93
PPP4CP60510 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4CP60510 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
PPP4CP60510 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4CP60510 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4CP60510 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4CP60510 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4CP60510 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.09■■□□□ 1.93
PPP4CP60510 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.09■■□□□ 1.93
PPP4CP60510 MIR939-201ENST00000401314 82 ntBASIC27.08■■□□□ 1.93
PPP4CP60510 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PPP4CP60510 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.08■■□□□ 1.93
PPP4CP60510 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.08■■□□□ 1.93
PPP4CP60510 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.07■■□□□ 1.92
PPP4CP60510 AP001330.3-201ENST00000520123 633 ntBASIC27.07■■□□□ 1.92
PPP4CP60510 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4CP60510 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4CP60510 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4CP60510 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
PPP4CP60510 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4CP60510 ZNRF2P3-201ENST00000424200 374 ntBASIC27.06■■□□□ 1.92
PPP4CP60510 MIR3181-201ENST00000578512 73 ntBASIC27.06■■□□□ 1.92
PPP4CP60510 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.06■■□□□ 1.92
PPP4CP60510 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.06■■□□□ 1.92
PPP4CP60510 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.05■■□□□ 1.92
PPP4CP60510 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.05■■□□□ 1.92
PPP4CP60510 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.05■■□□□ 1.92
PPP4CP60510 AF213884.3-201ENST00000563833 479 ntBASIC27.05■■□□□ 1.92
PPP4CP60510 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4CP60510 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 AC009086.3-201ENST00000623486 1008 ntBASIC27.04■■□□□ 1.92
PPP4CP60510 AC136469.2-201ENST00000623944 1028 ntBASIC27.04■■□□□ 1.92
PPP4CP60510 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
PPP4CP60510 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.04■■□□□ 1.92
PPP4CP60510 AC141586.4-201ENST00000624558 1573 ntBASIC27.04■■□□□ 1.92
PPP4CP60510 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
PPP4CP60510 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.04■■□□□ 1.92
PPP4CP60510 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4CP60510 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4CP60510 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4CP60510 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms