Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DUX4L7-201ENST00000630678 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L5-201ENST00000630834 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CLDN6P56747 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN6P56747 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CLDN6P56747 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN6P56747 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.88■■□□□ 1.09
CLDN6P56747 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN6P56747 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN6P56747 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.88■■□□□ 1.09
CLDN6P56747 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.88■■□□□ 1.09
CLDN6P56747 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN6P56747 AC126544.1-201ENST00000580842 1059 ntBASIC21.88■■□□□ 1.09
CLDN6P56747 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.88■■□□□ 1.09
CLDN6P56747 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CLDN6P56747 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN6P56747 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLDN6P56747 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN6P56747 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN6P56747 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLDN6P56747 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CLDN6P56747 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 AC004911.1-201ENST00000416316 871 ntBASIC21.87■■□□□ 1.09
CLDN6P56747 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.87■■□□□ 1.09
CLDN6P56747 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.87■■□□□ 1.09
CLDN6P56747 MIR6084-201ENST00000622012 110 ntBASIC21.87■■□□□ 1.09
CLDN6P56747 AC241377.3-202ENST00000626088 1088 ntBASIC21.87■■□□□ 1.09
CLDN6P56747 AC241585.3-202ENST00000628937 1088 ntBASIC21.87■■□□□ 1.09
CLDN6P56747 AC245100.8-202ENST00000629247 1058 ntBASIC21.87■■□□□ 1.09
CLDN6P56747 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN6P56747 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLDN6P56747 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 TSPY26P-201ENST00000476365 1326 ntBASIC21.86■■□□□ 1.09
CLDN6P56747 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CLDN6P56747 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.86■■□□□ 1.09
CLDN6P56747 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.86■■□□□ 1.09
CLDN6P56747 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN6P56747 AC092803.2-201ENST00000564287 1899 ntBASIC21.86■■□□□ 1.09
CLDN6P56747 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLDN6P56747 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN6P56747 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN6P56747 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN6P56747 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN6P56747 YBX1P1-201ENST00000445822 960 ntBASIC21.85■■□□□ 1.09
CLDN6P56747 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN6P56747 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN6P56747 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.85■■□□□ 1.09
CLDN6P56747 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN6P56747 pRNA.6-201ENST00000610482 90 ntBASIC21.85■■□□□ 1.09
CLDN6P56747 pRNA.5-201ENST00000612139 90 ntBASIC21.85■■□□□ 1.09
CLDN6P56747 pRNA.11-201ENST00000618423 90 ntBASIC21.85■■□□□ 1.09
CLDN6P56747 pRNA.13-201ENST00000619112 90 ntBASIC21.85■■□□□ 1.09
CLDN6P56747 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLDN6P56747 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
CLDN6P56747 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLDN6P56747 AL022069.1-201ENST00000568025 1636 ntBASIC21.84■■□□□ 1.09
CLDN6P56747 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.84■■□□□ 1.09
CLDN6P56747 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CLDN6P56747 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN6P56747 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN6P56747 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN6P56747 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.83■■□□□ 1.09
CLDN6P56747 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLDN6P56747 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.83■■□□□ 1.09
CLDN6P56747 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.83■■□□□ 1.09
CLDN6P56747 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CLDN6P56747 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN6P56747 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.83■■□□□ 1.09
CLDN6P56747 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN6P56747 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN6P56747 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CLDN6P56747 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.82■■□□□ 1.08
CLDN6P56747 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLDN6P56747 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN6P56747 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLDN6P56747 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN6P56747 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN6P56747 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN6P56747 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.82■■□□□ 1.08
CLDN6P56747 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN6P56747 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN6P56747 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.81■■□□□ 1.08
CLDN6P56747 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.81■■□□□ 1.08
CLDN6P56747 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN6P56747 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.81■■□□□ 1.08
CLDN6P56747 SLC47A1P1-202ENST00000449666 945 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms