Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.62■□□□□ 0.25
APOC4P55056 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APOC4P55056 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 PBX2P1-201ENST00000493219 1291 ntBASIC16.62■□□□□ 0.25
APOC4P55056 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.62■□□□□ 0.25
APOC4P55056 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 SYT6-210ENST00000641643 1587 ntBASIC16.62■□□□□ 0.25
APOC4P55056 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 AC009102.2-201ENST00000606772 1639 ntBASIC16.62■□□□□ 0.25
APOC4P55056 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOC4P55056 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.62■□□□□ 0.25
APOC4P55056 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC4P55056 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APOC4P55056 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC4P55056 UNC93B3-201ENST00000308076 687 ntBASIC16.61■□□□□ 0.25
APOC4P55056 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC4P55056 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.61■□□□□ 0.25
APOC4P55056 AL136162.1-201ENST00000607711 1078 ntBASIC16.61■□□□□ 0.25
APOC4P55056 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
APOC4P55056 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.61■□□□□ 0.25
APOC4P55056 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
APOC4P55056 AC135279.3-201ENST00000610945 1311 ntBASIC16.61■□□□□ 0.25
APOC4P55056 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC4P55056 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
APOC4P55056 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC4P55056 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC4P55056 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 AC020928.2-201ENST00000588717 2197 ntBASIC16.6■□□□□ 0.25
APOC4P55056 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.6■□□□□ 0.25
APOC4P55056 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC4P55056 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
APOC4P55056 AC106739.1-201ENST00000617035 715 ntBASIC16.6■□□□□ 0.25
APOC4P55056 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC4P55056 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.6■□□□□ 0.25
APOC4P55056 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
APOC4P55056 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
APOC4P55056 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC4P55056 AC141586.4-201ENST00000624558 1573 ntBASIC16.6■□□□□ 0.25
APOC4P55056 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
APOC4P55056 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC4P55056 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
APOC4P55056 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
APOC4P55056 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC4P55056 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC4P55056 C17orf82-201ENST00000623772 1530 ntBASIC16.59■□□□□ 0.25
APOC4P55056 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC4P55056 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC4P55056 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
APOC4P55056 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
APOC4P55056 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APOC4P55056 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOC4P55056 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOC4P55056 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOC4P55056 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.58■□□□□ 0.24
APOC4P55056 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APOC4P55056 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APOC4P55056 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC16.57■□□□□ 0.24
APOC4P55056 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.57■□□□□ 0.24
APOC4P55056 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.57■□□□□ 0.24
APOC4P55056 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.57■□□□□ 0.24
APOC4P55056 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.57■□□□□ 0.24
APOC4P55056 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
APOC4P55056 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
APOC4P55056 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.57■□□□□ 0.24
APOC4P55056 AC099791.2-201ENST00000605725 427 ntBASIC16.57■□□□□ 0.24
APOC4P55056 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APOC4P55056 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms