Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.34■■□□□ 1.01
NR1H2P55055 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NR1H2P55055 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR1H2P55055 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR1H2P55055 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
NR1H2P55055 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NR1H2P55055 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.34■■□□□ 1.01
NR1H2P55055 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NR1H2P55055 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR1H2P55055 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NR1H2P55055 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NR1H2P55055 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NR1H2P55055 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NR1H2P55055 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NR1H2P55055 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NR1H2P55055 AL137060.1-201ENST00000618151 2648 ntBASIC21.33■■□□□ 1
NR1H2P55055 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.33■■□□□ 1
NR1H2P55055 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
NR1H2P55055 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.33■■□□□ 1
NR1H2P55055 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NR1H2P55055 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NR1H2P55055 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NR1H2P55055 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.32■■□□□ 1
NR1H2P55055 RARRES2P1-201ENST00000474487 481 ntBASIC21.32■■□□□ 1
NR1H2P55055 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NR1H2P55055 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.32■■□□□ 1
NR1H2P55055 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NR1H2P55055 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.32■■□□□ 1
NR1H2P55055 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.32■■□□□ 1
NR1H2P55055 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NR1H2P55055 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.31■■□□□ 1
NR1H2P55055 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NR1H2P55055 DUX4L9-201ENST00000449051 1259 ntBASIC21.31■■□□□ 1
NR1H2P55055 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
NR1H2P55055 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
NR1H2P55055 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NR1H2P55055 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.3■■□□□ 1
NR1H2P55055 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.3■■□□□ 1
NR1H2P55055 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.3■■□□□ 1
NR1H2P55055 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.3■■□□□ 1
NR1H2P55055 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.3■■□□□ 1
NR1H2P55055 AC074183.2-201ENST00000623112 922 ntBASIC21.3■■□□□ 1
NR1H2P55055 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NR1H2P55055 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NR1H2P55055 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
NR1H2P55055 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.29■■□□□ 1
NR1H2P55055 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NR1H2P55055 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.29■■□□□ 1
NR1H2P55055 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.29■■□□□ 1
NR1H2P55055 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.29■■□□□ 1
NR1H2P55055 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NR1H2P55055 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.29■■□□□ 1
NR1H2P55055 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NR1H2P55055 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.28■■□□□ 1
NR1H2P55055 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
NR1H2P55055 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NR1H2P55055 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NR1H2P55055 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.28■■□□□ 1
NR1H2P55055 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NR1H2P55055 AC018755.3-202ENST00000596210 929 ntBASIC21.28■■□□□ 1
NR1H2P55055 BHLHE23-202ENST00000612929 1109 ntBASIC21.28■■□□□ 1
NR1H2P55055 MIR6765-201ENST00000614092 87 ntBASIC21.28■■□□□ 1
NR1H2P55055 AL359504.2-201ENST00000605506 1601 ntBASIC21.28■■□□□ 1
NR1H2P55055 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NR1H2P55055 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NR1H2P55055 AL121603.2-201ENST00000557373 2117 ntBASIC21.28■■□□□ 1
NR1H2P55055 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.27■■□□□ 1
NR1H2P55055 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR1H2P55055 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR1H2P55055 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NR1H2P55055 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
NR1H2P55055 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.27■■□□□ 1
NR1H2P55055 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NR1H2P55055 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NR1H2P55055 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.27■■□□□ 1
NR1H2P55055 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NR1H2P55055 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR1H2P55055 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR1H2P55055 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.26■□□□□ 0.99
NR1H2P55055 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.26■□□□□ 0.99
NR1H2P55055 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.26■□□□□ 0.99
NR1H2P55055 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms