Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 CDC48YDL126C 2508 nt4.13□□□□□ -1.75
UFD1P53044 KIN28YDL108W 921 nt4.13□□□□□ -1.75
UFD1P53044 CNL1YDR357C 369 nt4.13□□□□□ -1.75
UFD1P53044 tR(ACG)JtR(ACG)J 73 nt4.13□□□□□ -1.75
UFD1P53044 HPM1YIL110W 1134 nt4.13□□□□□ -1.75
UFD1P53044 YAL044W-AYAL044W-A 333 nt4.13□□□□□ -1.75
UFD1P53044 PML1YLR016C 615 nt4.13□□□□□ -1.75
UFD1P53044 OCA1YNL099C 717 nt4.13□□□□□ -1.75
UFD1P53044 CUZ1YNL155W 825 nt4.13□□□□□ -1.75
UFD1P53044 GSP2YOR185C 663 nt4.13□□□□□ -1.75
UFD1P53044 MAK3YPR051W 531 nt4.13□□□□□ -1.75
UFD1P53044 GMC1YDR506C 1827 nt4.13□□□□□ -1.75
UFD1P53044 SIR2YDL042C 1689 nt4.13□□□□□ -1.75
UFD1P53044 SDA1YGR245C 2304 nt4.12□□□□□ -1.75
UFD1P53044 RRN11YML043C 1524 nt4.12□□□□□ -1.75
UFD1P53044 SKG3YLR187W 3081 nt4.12□□□□□ -1.75
UFD1P53044 EUG1YDR518W 1554 nt4.12□□□□□ -1.75
UFD1P53044 SKG6YHR149C 2205 nt4.12□□□□□ -1.75
UFD1P53044 AIR2YDL175C 1035 nt4.12□□□□□ -1.75
UFD1P53044 RRP45YDR280W 918 nt4.12□□□□□ -1.75
UFD1P53044 ARO2YGL148W 1131 nt4.12□□□□□ -1.75
UFD1P53044 RSA3YLR221C 663 nt4.12□□□□□ -1.75
UFD1P53044 PDX3YBR035C 687 nt4.12□□□□□ -1.75
UFD1P53044 NNK1YKL171W 2787 nt4.12□□□□□ -1.75
UFD1P53044 KAR2YJL034W 2049 nt4.11□□□□□ -1.75
UFD1P53044 YGR291CYGR291C 222 nt4.11□□□□□ -1.75
UFD1P53044 tX(XXX)DtX(XXX)D 100 nt4.11□□□□□ -1.75
UFD1P53044 YIM1YMR152W 1098 nt4.11□□□□□ -1.75
UFD1P53044 HEM15YOR176W 1182 nt4.11□□□□□ -1.75
UFD1P53044 YBR298C-AYBR298C-A 222 nt4.11□□□□□ -1.75
UFD1P53044 YCL022CYCL022C 516 nt4.11□□□□□ -1.75
UFD1P53044 SBE2YDR351W 2595 nt4.11□□□□□ -1.75
UFD1P53044 RPN5YDL147W 1338 nt4.11□□□□□ -1.75
UFD1P53044 COT1YOR316C 1320 nt4.11□□□□□ -1.75
UFD1P53044 ATG1YGL180W 2694 nt4.11□□□□□ -1.75
UFD1P53044 RVB1YDR190C 1392 nt4.11□□□□□ -1.75
UFD1P53044 MID2YLR332W 1131 nt4.1□□□□□ -1.75
UFD1P53044 TOM7YNL070W 183 nt4.1□□□□□ -1.75
UFD1P53044 YNL296WYNL296W 315 nt4.1□□□□□ -1.75
UFD1P53044 PRT1YOR361C 2292 nt4.09□□□□□ -1.75
UFD1P53044 NOP16YER002W 696 nt4.09□□□□□ -1.75
UFD1P53044 VPS29YHR012W 849 nt4.09□□□□□ -1.75
UFD1P53044 YAL056C-AYAL056C-A 351 nt4.09□□□□□ -1.75
UFD1P53044 YMR010WYMR010W 1218 nt4.09□□□□□ -1.75
UFD1P53044 ADD37YMR184W 597 nt4.09□□□□□ -1.75
UFD1P53044 PHA2YNL316C 1005 nt4.09□□□□□ -1.75
UFD1P53044 YNR042WYNR042W 429 nt4.09□□□□□ -1.75
UFD1P53044 SER33YIL074C 1410 nt4.09□□□□□ -1.75
UFD1P53044 HRR25YPL204W 1485 nt4.09□□□□□ -1.75
UFD1P53044 PFK1YGR240C 2964 nt4.09□□□□□ -1.75
UFD1P53044 HOM3YER052C 1584 nt4.08□□□□□ -1.76
UFD1P53044 ACT1YFL039C 1128 nt4.08□□□□□ -1.76
UFD1P53044 SUT1YGL162W 900 nt4.08□□□□□ -1.76
UFD1P53044 YJL215CYJL215C 360 nt4.08□□□□□ -1.76
UFD1P53044 FRE7YOL152W 1863 nt4.08□□□□□ -1.76
UFD1P53044 SYP1YCR030C 2613 nt4.08□□□□□ -1.76
UFD1P53044 SUP35YDR172W 2058 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)CtK(CUU)C 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)D1tK(CUU)D1 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)D2tK(CUU)D2 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)E1tK(CUU)E1 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)E2tK(CUU)E2 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)FtK(CUU)F 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)G1tK(CUU)G1 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)G2tK(CUU)G2 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)G3tK(CUU)G3 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)ItK(CUU)I 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)JtK(CUU)J 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)KtK(CUU)K 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)MtK(CUU)M 73 nt4.07□□□□□ -1.76
UFD1P53044 tK(CUU)PtK(CUU)P 73 nt4.07□□□□□ -1.76
UFD1P53044 JAC1YGL018C 555 nt4.07□□□□□ -1.76
UFD1P53044 YNG2YHR090C 849 nt4.07□□□□□ -1.76
UFD1P53044 GPP1YIL053W 753 nt4.07□□□□□ -1.76
UFD1P53044 TDA5YLR426W 981 nt4.07□□□□□ -1.76
UFD1P53044 YPL199CYPL199C 723 nt4.07□□□□□ -1.76
UFD1P53044 YIL092WYIL092W 1902 nt4.07□□□□□ -1.76
UFD1P53044 YAP1802YGR241C 1707 nt4.07□□□□□ -1.76
UFD1P53044 YOL153CYOL153C 1746 nt4.07□□□□□ -1.76
UFD1P53044 LCB2YDR062W 1686 nt4.06□□□□□ -1.76
UFD1P53044 RRP3YHR065C 1506 nt4.06□□□□□ -1.76
UFD1P53044 PUT1YLR142W 1431 nt4.06□□□□□ -1.76
UFD1P53044 STE12YHR084W 2067 nt4.06□□□□□ -1.76
UFD1P53044 RIP1YEL024W 648 nt4.06□□□□□ -1.76
UFD1P53044 PEX22YAL055W 543 nt4.06□□□□□ -1.76
UFD1P53044 RRT7YLL030C 342 nt4.06□□□□□ -1.76
UFD1P53044 DRN1YGR093W 1524 nt4.05□□□□□ -1.76
UFD1P53044 TAF5YBR198C 2397 nt4.05□□□□□ -1.76
UFD1P53044 LPL1YOR059C 1353 nt4.05□□□□□ -1.76
UFD1P53044 RAM1YDL090C 1296 nt4.05□□□□□ -1.76
UFD1P53044 HNT2YDR305C 654 nt4.05□□□□□ -1.76
UFD1P53044 DCV1YFR012W 609 nt4.05□□□□□ -1.76
UFD1P53044 YMR315WYMR315W 1050 nt4.05□□□□□ -1.76
UFD1P53044 SMA1YPL027W 738 nt4.05□□□□□ -1.76
UFD1P53044 YPR109WYPR109W 885 nt4.05□□□□□ -1.76
UFD1P53044 LYS2YBR115C 4179 nt4.05□□□□□ -1.76
UFD1P53044 MMR1YLR190W 1476 nt4.05□□□□□ -1.76
UFD1P53044 PCL8YPL219W 1479 nt4.05□□□□□ -1.76
UFD1P53044 STB2YMR053C 2553 nt4.05□□□□□ -1.76
UFD1P53044 KIC1YHR102W 3243 nt4.04□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms