Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.68■■□□□ 1.06
POLR2JP52435 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.68■■□□□ 1.06
POLR2JP52435 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.68■■□□□ 1.06
POLR2JP52435 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 AC131274.2-201ENST00000580697 1507 ntBASIC21.68■■□□□ 1.06
POLR2JP52435 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.68■■□□□ 1.06
POLR2JP52435 ALDH1A3-203ENST00000557963 1670 ntBASIC21.68■■□□□ 1.06
POLR2JP52435 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
POLR2JP52435 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
POLR2JP52435 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
POLR2JP52435 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
POLR2JP52435 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 AC011551.1-201ENST00000614101 683 ntBASIC21.67■■□□□ 1.06
POLR2JP52435 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR2JP52435 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
POLR2JP52435 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
POLR2JP52435 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.66■■□□□ 1.06
POLR2JP52435 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
POLR2JP52435 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2JP52435 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2JP52435 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2JP52435 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2JP52435 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR2JP52435 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.65■■□□□ 1.06
POLR2JP52435 CLDN5-201ENST00000403084 2357 ntBASIC21.65■■□□□ 1.06
POLR2JP52435 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.65■■□□□ 1.06
POLR2JP52435 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
POLR2JP52435 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.65■■□□□ 1.06
POLR2JP52435 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.65■■□□□ 1.06
POLR2JP52435 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
POLR2JP52435 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
POLR2JP52435 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
POLR2JP52435 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR2JP52435 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
POLR2JP52435 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
POLR2JP52435 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
POLR2JP52435 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.64■■□□□ 1.06
POLR2JP52435 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.64■■□□□ 1.05
POLR2JP52435 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2JP52435 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2JP52435 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR2JP52435 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR2JP52435 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR2JP52435 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR2JP52435 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.63■■□□□ 1.05
POLR2JP52435 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.63■■□□□ 1.05
POLR2JP52435 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR2JP52435 GUSBP5-202ENST00000510805 1989 ntBASIC21.62■■□□□ 1.05
POLR2JP52435 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.62■■□□□ 1.05
POLR2JP52435 AC129492.7-201ENST00000622992 756 ntBASIC21.62■■□□□ 1.05
POLR2JP52435 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
POLR2JP52435 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POLR2JP52435 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.62■■□□□ 1.05
POLR2JP52435 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
POLR2JP52435 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2JP52435 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR2JP52435 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
POLR2JP52435 U85056.1-201ENST00000616429 682 ntBASIC21.61■■□□□ 1.05
POLR2JP52435 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2JP52435 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2JP52435 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2JP52435 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
POLR2JP52435 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR2JP52435 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR2JP52435 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
POLR2JP52435 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
POLR2JP52435 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2JP52435 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms