Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21■□□□□ 0.95
RNF144AP50876 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF144AP50876 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF144AP50876 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF144AP50876 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF144AP50876 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.99■□□□□ 0.95
RNF144AP50876 AC009299.2-201ENST00000482477 511 ntBASIC20.99■□□□□ 0.95
RNF144AP50876 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.99■□□□□ 0.95
RNF144AP50876 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF144AP50876 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF144AP50876 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
RNF144AP50876 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF144AP50876 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF144AP50876 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF144AP50876 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF144AP50876 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF144AP50876 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF144AP50876 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.98■□□□□ 0.95
RNF144AP50876 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF144AP50876 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF144AP50876 ALDH1A3-203ENST00000557963 1670 ntBASIC20.98■□□□□ 0.95
RNF144AP50876 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF144AP50876 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF144AP50876 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF144AP50876 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF144AP50876 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF144AP50876 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
RNF144AP50876 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.97■□□□□ 0.95
RNF144AP50876 AC137630.3-201ENST00000607245 391 ntBASIC20.97■□□□□ 0.95
RNF144AP50876 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF144AP50876 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RNF144AP50876 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF144AP50876 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RNF144AP50876 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF144AP50876 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF144AP50876 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF144AP50876 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF144AP50876 AC239859.2-201ENST00000444165 318 ntBASIC20.96■□□□□ 0.95
RNF144AP50876 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF144AP50876 AC004448.1-201ENST00000458332 883 ntBASIC20.96■□□□□ 0.95
RNF144AP50876 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF144AP50876 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF144AP50876 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF144AP50876 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF144AP50876 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF144AP50876 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.95■□□□□ 0.95
RNF144AP50876 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF144AP50876 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF144AP50876 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF144AP50876 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF144AP50876 SNX5-217ENST00000606557 1087 ntBASIC20.95■□□□□ 0.94
RNF144AP50876 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
RNF144AP50876 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF144AP50876 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF144AP50876 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RNF144AP50876 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF144AP50876 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 DUSP8P5-201ENST00000422884 1815 ntBASIC20.94■□□□□ 0.94
RNF144AP50876 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RNF144AP50876 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF144AP50876 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF144AP50876 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF144AP50876 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF144AP50876 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms