Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.97■■□□□ 1.75
HTTP42858 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.97■■□□□ 1.75
HTTP42858 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.97■■□□□ 1.75
HTTP42858 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.96■■□□□ 1.75
HTTP42858 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTTP42858 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTTP42858 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
HTTP42858 AC241377.3-202ENST00000626088 1088 ntBASIC25.96■■□□□ 1.75
HTTP42858 AC241585.3-202ENST00000628937 1088 ntBASIC25.96■■□□□ 1.75
HTTP42858 AC245100.8-202ENST00000629247 1058 ntBASIC25.96■■□□□ 1.75
HTTP42858 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HTTP42858 AL355802.2-201ENST00000402069 882 ntBASIC25.96■■□□□ 1.75
HTTP42858 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
HTTP42858 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HTTP42858 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
HTTP42858 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
HTTP42858 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.95■■□□□ 1.74
HTTP42858 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
HTTP42858 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
HTTP42858 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.95■■□□□ 1.74
HTTP42858 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HTTP42858 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.94■■□□□ 1.74
HTTP42858 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.94■■□□□ 1.74
HTTP42858 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.94■■□□□ 1.74
HTTP42858 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
HTTP42858 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HTTP42858 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.94■■□□□ 1.74
HTTP42858 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HTTP42858 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.93■■□□□ 1.74
HTTP42858 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HTTP42858 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.93■■□□□ 1.74
HTTP42858 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.93■■□□□ 1.74
HTTP42858 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.93■■□□□ 1.74
HTTP42858 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
HTTP42858 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
HTTP42858 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HTTP42858 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.92■■□□□ 1.74
HTTP42858 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.92■■□□□ 1.74
HTTP42858 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
HTTP42858 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HTTP42858 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
HTTP42858 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
HTTP42858 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
HTTP42858 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.92■■□□□ 1.74
HTTP42858 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HTTP42858 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HTTP42858 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
HTTP42858 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HTTP42858 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.91■■□□□ 1.74
HTTP42858 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.91■■□□□ 1.74
HTTP42858 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
HTTP42858 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
HTTP42858 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.9■■□□□ 1.74
HTTP42858 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HTTP42858 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HTTP42858 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HTTP42858 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.9■■□□□ 1.74
HTTP42858 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.9■■□□□ 1.74
HTTP42858 AC097639.1-201ENST00000565519 1891 ntBASIC25.9■■□□□ 1.74
HTTP42858 NCF1B-203ENST00000435988 1254 ntBASIC25.9■■□□□ 1.74
HTTP42858 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.9■■□□□ 1.74
HTTP42858 AC080038.1-201ENST00000611274 1154 ntBASIC25.9■■□□□ 1.74
HTTP42858 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HTTP42858 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HTTP42858 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.89■■□□□ 1.74
HTTP42858 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
HTTP42858 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.89■■□□□ 1.74
HTTP42858 AL499627.2-201ENST00000606283 725 ntBASIC25.89■■□□□ 1.74
HTTP42858 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.89■■□□□ 1.73
HTTP42858 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
HTTP42858 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.89■■□□□ 1.73
HTTP42858 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.89■■□□□ 1.73
HTTP42858 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
HTTP42858 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.88■■□□□ 1.73
HTTP42858 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.88■■□□□ 1.73
HTTP42858 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HTTP42858 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.88■■□□□ 1.73
HTTP42858 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
HTTP42858 IGHV3-19-201ENST00000521488 291 ntBASIC25.88■■□□□ 1.73
HTTP42858 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.88■■□□□ 1.73
HTTP42858 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.88■■□□□ 1.73
HTTP42858 AL354811.1-201ENST00000610286 706 ntBASIC25.88■■□□□ 1.73
HTTP42858 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.87■■□□□ 1.73
HTTP42858 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HTTP42858 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTTP42858 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
HTTP42858 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTTP42858 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
HTTP42858 AC126544.1-201ENST00000580842 1059 ntBASIC25.87■■□□□ 1.73
HTTP42858 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.87■■□□□ 1.73
HTTP42858 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.87■■□□□ 1.73
HTTP42858 TSPY20P-201ENST00000450910 630 ntBASIC25.87■■□□□ 1.73
HTTP42858 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.87■■□□□ 1.73
HTTP42858 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.86■■□□□ 1.73
HTTP42858 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms