Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RPS9AYPL081W 594 nt4.16□□□□□ -1.74
CDC40P40968 HOS2YGL194C 1359 nt4.15□□□□□ -1.74
CDC40P40968 BOI2YER114C 3123 nt4.15□□□□□ -1.74
CDC40P40968 APM1YPL259C 1428 nt4.15□□□□□ -1.74
CDC40P40968 YPT32YGL210W 669 nt4.15□□□□□ -1.75
CDC40P40968 COG5YNL051W 1212 nt4.15□□□□□ -1.75
CDC40P40968 SPS19YNL202W 879 nt4.15□□□□□ -1.75
CDC40P40968 ENV7YPL236C 1095 nt4.15□□□□□ -1.75
CDC40P40968 ASA1YPR085C 1332 nt4.15□□□□□ -1.75
CDC40P40968 PRM2YIL037C 1971 nt4.14□□□□□ -1.75
CDC40P40968 SIR1YKR101W 1965 nt4.14□□□□□ -1.75
CDC40P40968 HXT14YNL318C 1623 nt4.14□□□□□ -1.75
CDC40P40968 STV1YMR054W 2673 nt4.14□□□□□ -1.75
CDC40P40968 SRS2YJL092W 3525 nt4.14□□□□□ -1.75
CDC40P40968 DED81YHR019C 1665 nt4.14□□□□□ -1.75
CDC40P40968 RKM4YDR257C 1485 nt4.14□□□□□ -1.75
CDC40P40968 YOR1YGR281W 4434 nt4.14□□□□□ -1.75
CDC40P40968 YDL114WYDL114W 927 nt4.14□□□□□ -1.75
CDC40P40968 YLL017WYLL017W 312 nt4.14□□□□□ -1.75
CDC40P40968 LST8YNL006W 912 nt4.14□□□□□ -1.75
CDC40P40968 QCR2YPR191W 1107 nt4.14□□□□□ -1.75
CDC40P40968 MSC2YDR205W 2175 nt4.14□□□□□ -1.75
CDC40P40968 TAF12YDR145W 1620 nt4.13□□□□□ -1.75
CDC40P40968 TEL1YBL088C 8364 nt4.13□□□□□ -1.75
CDC40P40968 RPL34AYER056C-A 366 nt4.13□□□□□ -1.75
CDC40P40968 AAD15YOL165C 432 nt4.13□□□□□ -1.75
CDC40P40968 BRE2YLR015W 1518 nt4.12□□□□□ -1.75
CDC40P40968 YCR050CYCR050C 309 nt4.12□□□□□ -1.75
CDC40P40968 DCV1YFR012W 609 nt4.12□□□□□ -1.75
CDC40P40968 SRB5YGR104C 924 nt4.12□□□□□ -1.75
CDC40P40968 SAE3YHR079C-A 276 nt4.12□□□□□ -1.75
CDC40P40968 ISY1YJR050W 708 nt4.12□□□□□ -1.75
CDC40P40968 YRA2YKL214C 612 nt4.12□□□□□ -1.75
CDC40P40968 YLR374CYLR374C 390 nt4.12□□□□□ -1.75
CDC40P40968 PIN2YOR104W 849 nt4.12□□□□□ -1.75
CDC40P40968 UIP4YPL186C 915 nt4.12□□□□□ -1.75
CDC40P40968 ATG12YBR217W 561 nt4.12□□□□□ -1.75
CDC40P40968 EMP46YLR080W 1335 nt4.12□□□□□ -1.75
CDC40P40968 NUP133YKR082W 3474 nt4.12□□□□□ -1.75
CDC40P40968 LAS21YJL062W 2493 nt4.12□□□□□ -1.75
CDC40P40968 CDC6YJL194W 1542 nt4.11□□□□□ -1.75
CDC40P40968 SSA2YLL024C 1920 nt4.11□□□□□ -1.75
CDC40P40968 MMS2YGL087C 414 nt4.11□□□□□ -1.75
CDC40P40968 YGR079WYGR079W 1113 nt4.11□□□□□ -1.75
CDC40P40968 NAT2YGR147C 867 nt4.11□□□□□ -1.75
CDC40P40968 CBP4YGR174C 513 nt4.11□□□□□ -1.75
CDC40P40968 RRP4YHR069C 1080 nt4.11□□□□□ -1.75
CDC40P40968 CIA2YHR122W 696 nt4.11□□□□□ -1.75
CDC40P40968 NIT2YJL126W 924 nt4.11□□□□□ -1.75
CDC40P40968 RPS19BYNL302C 435 nt4.11□□□□□ -1.75
CDC40P40968 YBR134WYBR134W 402 nt4.11□□□□□ -1.75
CDC40P40968 COT1YOR316C 1320 nt4.11□□□□□ -1.75
CDC40P40968 NAM2YLR382C 2685 nt4.11□□□□□ -1.75
CDC40P40968 MST1YKL194C 1389 nt4.11□□□□□ -1.75
CDC40P40968 GSM1YJL103C 1857 nt4.11□□□□□ -1.75
CDC40P40968 MDR1YGR100W 2853 nt4.11□□□□□ -1.75
CDC40P40968 MNS1YJR131W 1650 nt4.1□□□□□ -1.75
CDC40P40968 YCL065WYCL065W 369 nt4.1□□□□□ -1.75
CDC40P40968 YDL022C-AYDL022C-A 249 nt4.1□□□□□ -1.75
CDC40P40968 PRS2YER099C 957 nt4.1□□□□□ -1.75
CDC40P40968 NSE1YLR007W 1011 nt4.1□□□□□ -1.75
CDC40P40968 YPR015CYPR015C 744 nt4.1□□□□□ -1.75
CDC40P40968 YPR195CYPR195C 330 nt4.1□□□□□ -1.75
CDC40P40968 NDC1YML031W 1968 nt4.1□□□□□ -1.75
CDC40P40968 TUB3YML124C 1338 nt4.1□□□□□ -1.75
CDC40P40968 BRL1YHR036W 1416 nt4.1□□□□□ -1.75
CDC40P40968 MSH1YHR120W 2880 nt4.1□□□□□ -1.75
CDC40P40968 SOF1YLL011W 1470 nt4.1□□□□□ -1.75
CDC40P40968 KAP114YGL241W 3015 nt4.1□□□□□ -1.75
CDC40P40968 MRK1YDL079C 1506 nt4.1□□□□□ -1.75
CDC40P40968 ATG20YDL113C 1923 nt4.09□□□□□ -1.75
CDC40P40968 YRA1YDR381W 681 nt4.09□□□□□ -1.75
CDC40P40968 YIL152WYIL152W 708 nt4.09□□□□□ -1.75
CDC40P40968 PRP45YAL032C 1140 nt4.09□□□□□ -1.75
CDC40P40968 MIM2YLR099W-A 264 nt4.09□□□□□ -1.75
CDC40P40968 GPM3YOL056W 912 nt4.09□□□□□ -1.75
CDC40P40968 ANT1YPR128C 987 nt4.09□□□□□ -1.75
CDC40P40968 NCE102YPR149W 522 nt4.09□□□□□ -1.75
CDC40P40968 UBC4YBR082C 447 nt4.09□□□□□ -1.75
CDC40P40968 YCL022CYCL022C 516 nt4.09□□□□□ -1.75
CDC40P40968 ALR2YFL050C 2577 nt4.09□□□□□ -1.75
CDC40P40968 SSB1YDL229W 1842 nt4.09□□□□□ -1.76
CDC40P40968 SSB2YNL209W 1842 nt4.09□□□□□ -1.76
CDC40P40968 HOT1YMR172W 2160 nt4.09□□□□□ -1.76
CDC40P40968 TIF4632YGL049C 2745 nt4.08□□□□□ -1.76
CDC40P40968 ROT2YBR229C 2865 nt4.08□□□□□ -1.76
CDC40P40968 PHO13YDL236W 939 nt4.08□□□□□ -1.76
CDC40P40968 MOB2YFL034C-B 864 nt4.08□□□□□ -1.76
CDC40P40968 VMA22YHR060W 546 nt4.08□□□□□ -1.76
CDC40P40968 MNN11YJL183W 1269 nt4.08□□□□□ -1.76
CDC40P40968 CBF1YJR060W 1056 nt4.08□□□□□ -1.76
CDC40P40968 YKR047WYKR047W 306 nt4.08□□□□□ -1.76
CDC40P40968 UPS2YLR168C 693 nt4.08□□□□□ -1.76
CDC40P40968 CPR6YLR216C 1116 nt4.08□□□□□ -1.76
CDC40P40968 CNA1YLR433C 1662 nt4.08□□□□□ -1.76
CDC40P40968 SNO4YMR322C 714 nt4.08□□□□□ -1.76
CDC40P40968 HSP33YOR391C 714 nt4.08□□□□□ -1.76
CDC40P40968 HSP82YPL240C 2130 nt4.08□□□□□ -1.76
CDC40P40968 HSP32YPL280W 714 nt4.08□□□□□ -1.76
CDC40P40968 ARO7YPR060C 771 nt4.08□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms