Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS4P35443 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
THBS4P35443 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
THBS4P35443 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS4P35443 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS4P35443 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
THBS4P35443 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.9■□□□□ 0.78
THBS4P35443 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.9■□□□□ 0.78
THBS4P35443 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
THBS4P35443 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THBS4P35443 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THBS4P35443 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.89■□□□□ 0.77
THBS4P35443 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THBS4P35443 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
THBS4P35443 SNX5-217ENST00000606557 1087 ntBASIC19.89■□□□□ 0.77
THBS4P35443 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS4P35443 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS4P35443 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.88■□□□□ 0.77
THBS4P35443 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.88■□□□□ 0.77
THBS4P35443 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.88■□□□□ 0.77
THBS4P35443 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.88■□□□□ 0.77
THBS4P35443 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.88■□□□□ 0.77
THBS4P35443 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS4P35443 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
THBS4P35443 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS4P35443 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS4P35443 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
THBS4P35443 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS4P35443 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS4P35443 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS4P35443 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS4P35443 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
THBS4P35443 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
THBS4P35443 AC012676.1-201ENST00000574705 1949 ntBASIC19.86■□□□□ 0.77
THBS4P35443 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS4P35443 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS4P35443 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.86■□□□□ 0.77
THBS4P35443 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS4P35443 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.86■□□□□ 0.77
THBS4P35443 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.86■□□□□ 0.77
THBS4P35443 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.86■□□□□ 0.77
THBS4P35443 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THBS4P35443 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THBS4P35443 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS4P35443 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS4P35443 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS4P35443 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 MIR6724-1-201ENST00000616420 92 ntBASIC19.85■□□□□ 0.77
THBS4P35443 MIR6724-2-201ENST00000616483 92 ntBASIC19.85■□□□□ 0.77
THBS4P35443 MIR6724-4-201ENST00000617390 92 ntBASIC19.85■□□□□ 0.77
THBS4P35443 MIR6724-3-201ENST00000622482 92 ntBASIC19.85■□□□□ 0.77
THBS4P35443 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS4P35443 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS4P35443 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
THBS4P35443 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.84■□□□□ 0.77
THBS4P35443 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 AC004448.1-201ENST00000458332 883 ntBASIC19.84■□□□□ 0.77
THBS4P35443 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
THBS4P35443 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
THBS4P35443 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
THBS4P35443 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
THBS4P35443 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.83■□□□□ 0.77
THBS4P35443 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.83■□□□□ 0.77
THBS4P35443 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.83■□□□□ 0.77
THBS4P35443 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.83■□□□□ 0.77
THBS4P35443 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
THBS4P35443 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.83■□□□□ 0.76
THBS4P35443 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.83■□□□□ 0.76
THBS4P35443 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
THBS4P35443 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
THBS4P35443 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms