Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CKS2P33552 HLA-V-202ENST00000446817 847 ntBASIC16.66■□□□□ 0.26
CKS2P33552 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CKS2P33552 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.66■□□□□ 0.26
CKS2P33552 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.66■□□□□ 0.26
CKS2P33552 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.66■□□□□ 0.26
CKS2P33552 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CKS2P33552 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.65■□□□□ 0.26
CKS2P33552 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CKS2P33552 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKS2P33552 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.64■□□□□ 0.26
CKS2P33552 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CKS2P33552 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CKS2P33552 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CKS2P33552 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.64■□□□□ 0.25
CKS2P33552 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 AL024507.2-201ENST00000606070 2574 ntBASIC16.64■□□□□ 0.25
CKS2P33552 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKS2P33552 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CKS2P33552 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.63■□□□□ 0.25
CKS2P33552 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CKS2P33552 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CKS2P33552 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.63■□□□□ 0.25
CKS2P33552 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CKS2P33552 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 AC007375.3-201ENST00000600936 2314 ntBASIC16.63■□□□□ 0.25
CKS2P33552 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKS2P33552 FOXO3B-201ENST00000395675 1928 ntBASIC16.62■□□□□ 0.25
CKS2P33552 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.62■□□□□ 0.25
CKS2P33552 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.62■□□□□ 0.25
CKS2P33552 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CKS2P33552 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.62■□□□□ 0.25
CKS2P33552 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKS2P33552 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKS2P33552 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS2P33552 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS2P33552 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKS2P33552 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.61■□□□□ 0.25
CKS2P33552 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.61■□□□□ 0.25
CKS2P33552 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.61■□□□□ 0.25
CKS2P33552 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKS2P33552 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.61■□□□□ 0.25
CKS2P33552 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CKS2P33552 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CKS2P33552 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CKS2P33552 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.6■□□□□ 0.25
CKS2P33552 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CKS2P33552 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 AL162393.1-201ENST00000437852 946 ntBASIC16.6■□□□□ 0.25
CKS2P33552 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.6■□□□□ 0.25
CKS2P33552 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKS2P33552 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS2P33552 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS2P33552 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKS2P33552 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms