Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.36■■■□□ 2.13
CHRNA5P30532 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.36■■■□□ 2.13
CHRNA5P30532 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
CHRNA5P30532 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CHRNA5P30532 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.36■■■□□ 2.13
CHRNA5P30532 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CHRNA5P30532 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHRNA5P30532 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CHRNA5P30532 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CHRNA5P30532 AL022069.1-201ENST00000568025 1636 ntBASIC28.35■■■□□ 2.13
CHRNA5P30532 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.35■■■□□ 2.13
CHRNA5P30532 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHRNA5P30532 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHRNA5P30532 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.34■■■□□ 2.13
CHRNA5P30532 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHRNA5P30532 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHRNA5P30532 AC012414.1-201ENST00000556676 535 ntBASIC28.34■■■□□ 2.13
CHRNA5P30532 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHRNA5P30532 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
CHRNA5P30532 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.33■■■□□ 2.13
CHRNA5P30532 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.33■■■□□ 2.13
CHRNA5P30532 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CHRNA5P30532 MIR572-201ENST00000384983 95 ntBASIC28.32■■■□□ 2.12
CHRNA5P30532 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.32■■■□□ 2.12
CHRNA5P30532 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CHRNA5P30532 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.32■■■□□ 2.12
CHRNA5P30532 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.31■■■□□ 2.12
CHRNA5P30532 IGHV3-19-201ENST00000521488 291 ntBASIC28.31■■■□□ 2.12
CHRNA5P30532 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHRNA5P30532 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.31■■■□□ 2.12
CHRNA5P30532 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CHRNA5P30532 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHRNA5P30532 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.31■■■□□ 2.12
CHRNA5P30532 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHRNA5P30532 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHRNA5P30532 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
CHRNA5P30532 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHRNA5P30532 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.3■■■□□ 2.12
CHRNA5P30532 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC28.3■■■□□ 2.12
CHRNA5P30532 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC28.3■■■□□ 2.12
CHRNA5P30532 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.3■■■□□ 2.12
CHRNA5P30532 KRT18P14-201ENST00000534205 1250 ntBASIC28.3■■■□□ 2.12
CHRNA5P30532 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.29■■■□□ 2.12
CHRNA5P30532 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.29■■■□□ 2.12
CHRNA5P30532 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CHRNA5P30532 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CHRNA5P30532 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.29■■■□□ 2.12
CHRNA5P30532 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.28■■■□□ 2.12
CHRNA5P30532 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CHRNA5P30532 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CHRNA5P30532 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CHRNA5P30532 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.28■■■□□ 2.12
CHRNA5P30532 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.28■■■□□ 2.12
CHRNA5P30532 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CHRNA5P30532 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHRNA5P30532 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CHRNA5P30532 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.26■■■□□ 2.12
CHRNA5P30532 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.26■■■□□ 2.12
CHRNA5P30532 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.26■■■□□ 2.11
CHRNA5P30532 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.26■■■□□ 2.11
CHRNA5P30532 TERF1P2-201ENST00000583350 1212 ntBASIC28.26■■■□□ 2.11
CHRNA5P30532 AL354811.1-201ENST00000610286 706 ntBASIC28.26■■■□□ 2.11
CHRNA5P30532 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.26■■■□□ 2.11
CHRNA5P30532 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHRNA5P30532 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.25■■■□□ 2.11
CHRNA5P30532 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHRNA5P30532 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHRNA5P30532 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
CHRNA5P30532 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.25■■■□□ 2.11
CHRNA5P30532 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHRNA5P30532 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHRNA5P30532 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.25■■■□□ 2.11
CHRNA5P30532 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.24■■■□□ 2.11
CHRNA5P30532 SLC6A10P-202ENST00000431994 2058 ntBASIC28.24■■■□□ 2.11
CHRNA5P30532 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHRNA5P30532 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.24■■■□□ 2.11
CHRNA5P30532 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.24■■■□□ 2.11
CHRNA5P30532 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CHRNA5P30532 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.24■■■□□ 2.11
CHRNA5P30532 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHRNA5P30532 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHRNA5P30532 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHRNA5P30532 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.23■■■□□ 2.11
CHRNA5P30532 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.23■■■□□ 2.11
CHRNA5P30532 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
CHRNA5P30532 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.22■■■□□ 2.11
CHRNA5P30532 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CHRNA5P30532 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
CHRNA5P30532 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms