Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.17■□□□□ 0.66
COL8A2P25067 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COL8A2P25067 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.17■□□□□ 0.66
COL8A2P25067 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL8A2P25067 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL8A2P25067 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL8A2P25067 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.16■□□□□ 0.66
COL8A2P25067 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL8A2P25067 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.16■□□□□ 0.66
COL8A2P25067 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL8A2P25067 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL8A2P25067 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL8A2P25067 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL8A2P25067 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.15■□□□□ 0.66
COL8A2P25067 ALDH1A3-203ENST00000557963 1670 ntBASIC19.15■□□□□ 0.66
COL8A2P25067 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL8A2P25067 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL8A2P25067 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.15■□□□□ 0.66
COL8A2P25067 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.15■□□□□ 0.66
COL8A2P25067 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL8A2P25067 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.15■□□□□ 0.66
COL8A2P25067 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.15■□□□□ 0.66
COL8A2P25067 AL136162.1-201ENST00000607711 1078 ntBASIC19.15■□□□□ 0.66
COL8A2P25067 AC106739.1-201ENST00000617035 715 ntBASIC19.15■□□□□ 0.66
COL8A2P25067 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL8A2P25067 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL8A2P25067 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL8A2P25067 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL8A2P25067 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL8A2P25067 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL8A2P25067 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL8A2P25067 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
COL8A2P25067 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.14■□□□□ 0.65
COL8A2P25067 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL8A2P25067 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL8A2P25067 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL8A2P25067 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL8A2P25067 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.14■□□□□ 0.65
COL8A2P25067 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL8A2P25067 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.14■□□□□ 0.65
COL8A2P25067 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.13■□□□□ 0.65
COL8A2P25067 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.13■□□□□ 0.65
COL8A2P25067 AC133561.4-201ENST00000566112 224 ntBASIC19.13■□□□□ 0.65
COL8A2P25067 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.13■□□□□ 0.65
COL8A2P25067 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.13■□□□□ 0.65
COL8A2P25067 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL8A2P25067 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.13■□□□□ 0.65
COL8A2P25067 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL8A2P25067 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL8A2P25067 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL8A2P25067 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL8A2P25067 AC099791.2-201ENST00000605725 427 ntBASIC19.12■□□□□ 0.65
COL8A2P25067 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.12■□□□□ 0.65
COL8A2P25067 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL8A2P25067 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL8A2P25067 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL8A2P25067 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL8A2P25067 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL8A2P25067 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL8A2P25067 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 AC024257.2-201ENST00000549699 147 ntBASIC19.11■□□□□ 0.65
COL8A2P25067 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.11■□□□□ 0.65
COL8A2P25067 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.11■□□□□ 0.65
COL8A2P25067 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL8A2P25067 AC135279.3-201ENST00000610945 1311 ntBASIC19.1■□□□□ 0.65
COL8A2P25067 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.1■□□□□ 0.65
COL8A2P25067 DUX4L19-201ENST00000557448 1267 ntBASIC19.1■□□□□ 0.65
COL8A2P25067 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.1■□□□□ 0.65
COL8A2P25067 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.1■□□□□ 0.65
COL8A2P25067 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL8A2P25067 C17orf82-201ENST00000623772 1530 ntBASIC19.1■□□□□ 0.65
COL8A2P25067 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL8A2P25067 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.09■□□□□ 0.65
COL8A2P25067 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL8A2P25067 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL8A2P25067 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL8A2P25067 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL8A2P25067 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms