Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
H2AFXP16104 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
H2AFXP16104 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.72■■□□□ 1.39
H2AFXP16104 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
H2AFXP16104 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.71■■□□□ 1.39
H2AFXP16104 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
H2AFXP16104 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.71■■□□□ 1.39
H2AFXP16104 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
H2AFXP16104 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
H2AFXP16104 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.69■■□□□ 1.38
H2AFXP16104 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
H2AFXP16104 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
H2AFXP16104 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.69■■□□□ 1.38
H2AFXP16104 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
H2AFXP16104 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.69■■□□□ 1.38
H2AFXP16104 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
H2AFXP16104 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.68■■□□□ 1.38
H2AFXP16104 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.68■■□□□ 1.38
H2AFXP16104 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.68■■□□□ 1.38
H2AFXP16104 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
H2AFXP16104 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
H2AFXP16104 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
H2AFXP16104 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.67■■□□□ 1.38
H2AFXP16104 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.67■■□□□ 1.38
H2AFXP16104 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.67■■□□□ 1.38
H2AFXP16104 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.67■■□□□ 1.38
H2AFXP16104 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
H2AFXP16104 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
H2AFXP16104 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.66■■□□□ 1.38
H2AFXP16104 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
H2AFXP16104 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
H2AFXP16104 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.66■■□□□ 1.38
H2AFXP16104 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
H2AFXP16104 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.66■■□□□ 1.38
H2AFXP16104 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.66■■□□□ 1.38
H2AFXP16104 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
H2AFXP16104 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.66■■□□□ 1.38
H2AFXP16104 AL161729.1-201ENST00000604104 1402 ntBASIC23.66■■□□□ 1.38
H2AFXP16104 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.66■■□□□ 1.38
H2AFXP16104 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
H2AFXP16104 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.65■■□□□ 1.38
H2AFXP16104 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.65■■□□□ 1.38
H2AFXP16104 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.65■■□□□ 1.38
H2AFXP16104 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
H2AFXP16104 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.65■■□□□ 1.38
H2AFXP16104 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
H2AFXP16104 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
H2AFXP16104 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
H2AFXP16104 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H2AFXP16104 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H2AFXP16104 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
H2AFXP16104 AC008813.1-201ENST00000536597 885 ntBASIC23.64■■□□□ 1.37
H2AFXP16104 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.64■■□□□ 1.37
H2AFXP16104 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
H2AFXP16104 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.64■■□□□ 1.37
H2AFXP16104 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
H2AFXP16104 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
H2AFXP16104 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
H2AFXP16104 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
H2AFXP16104 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
H2AFXP16104 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
H2AFXP16104 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
H2AFXP16104 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
H2AFXP16104 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.63■■□□□ 1.37
H2AFXP16104 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
H2AFXP16104 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.62■■□□□ 1.37
H2AFXP16104 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
H2AFXP16104 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
H2AFXP16104 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms