Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL354811.1-201ENST00000610286 706 ntBASIC39.68■■■■□ 3.94
CFTRP13569 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC39.68■■■■□ 3.94
CFTRP13569 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC39.68■■■■□ 3.94
CFTRP13569 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
CFTRP13569 HLA-L-209ENST00000420110 1011 ntBASIC39.67■■■■□ 3.94
CFTRP13569 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC39.66■■■■□ 3.94
CFTRP13569 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC39.66■■■■□ 3.94
CFTRP13569 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC39.66■■■■□ 3.94
CFTRP13569 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
CFTRP13569 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
CFTRP13569 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC39.66■■■■□ 3.94
CFTRP13569 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
CFTRP13569 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
CFTRP13569 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC39.65■■■■□ 3.94
CFTRP13569 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC39.65■■■■□ 3.94
CFTRP13569 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CFTRP13569 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC39.65■■■■□ 3.94
CFTRP13569 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC39.64■■■■□ 3.94
CFTRP13569 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC39.64■■■■□ 3.94
CFTRP13569 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC39.64■■■■□ 3.94
CFTRP13569 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC39.64■■■■□ 3.94
CFTRP13569 KRT18P14-201ENST00000534205 1250 ntBASIC39.64■■■■□ 3.94
CFTRP13569 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CFTRP13569 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC39.64■■■■□ 3.94
CFTRP13569 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC39.63■■■■□ 3.94
CFTRP13569 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC39.63■■■■□ 3.94
CFTRP13569 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC39.63■■■■□ 3.94
CFTRP13569 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC39.63■■■■□ 3.94
CFTRP13569 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC39.63■■■■□ 3.94
CFTRP13569 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC39.63■■■■□ 3.93
CFTRP13569 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC39.62■■■■□ 3.93
CFTRP13569 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC39.62■■■■□ 3.93
CFTRP13569 RAP2CP1-201ENST00000605103 478 ntBASIC39.62■■■■□ 3.93
CFTRP13569 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
CFTRP13569 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
CFTRP13569 CD37-213ENST00000598095 1598 ntTSL 2 BASIC39.62■■■■□ 3.93
CFTRP13569 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC39.62■■■■□ 3.93
CFTRP13569 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC39.62■■■■□ 3.93
CFTRP13569 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC39.61■■■■□ 3.93
CFTRP13569 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC39.61■■■■□ 3.93
CFTRP13569 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC39.61■■■■□ 3.93
CFTRP13569 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC39.61■■■■□ 3.93
CFTRP13569 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC39.61■■■■□ 3.93
CFTRP13569 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC39.61■■■■□ 3.93
CFTRP13569 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC39.61■■■■□ 3.93
CFTRP13569 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
CFTRP13569 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC39.6■■■■□ 3.93
CFTRP13569 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC39.6■■■■□ 3.93
CFTRP13569 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
CFTRP13569 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
CFTRP13569 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.59■■■■□ 3.93
CFTRP13569 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC39.59■■■■□ 3.93
CFTRP13569 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
CFTRP13569 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
CFTRP13569 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC39.58■■■■□ 3.93
CFTRP13569 KRT18P61-201ENST00000585825 1298 ntBASIC39.58■■■■□ 3.93
CFTRP13569 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC39.57■■■■□ 3.93
CFTRP13569 NTF6G-201ENST00000591094 616 ntBASIC39.57■■■■□ 3.93
CFTRP13569 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
CFTRP13569 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC39.56■■■■□ 3.92
CFTRP13569 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
CFTRP13569 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC39.56■■■■□ 3.92
CFTRP13569 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC39.56■■■■□ 3.92
CFTRP13569 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
CFTRP13569 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC39.55■■■■□ 3.92
CFTRP13569 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
CFTRP13569 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC39.54■■■■□ 3.92
CFTRP13569 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC39.54■■■■□ 3.92
CFTRP13569 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC39.54■■■■□ 3.92
CFTRP13569 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC39.53■■■■□ 3.92
CFTRP13569 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC39.53■■■■□ 3.92
CFTRP13569 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC39.53■■■■□ 3.92
CFTRP13569 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
CFTRP13569 SLC6A10P-202ENST00000431994 2058 ntBASIC39.52■■■■□ 3.92
CFTRP13569 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
CFTRP13569 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
CFTRP13569 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC39.52■■■■□ 3.92
CFTRP13569 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
CFTRP13569 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC39.52■■■■□ 3.92
CFTRP13569 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC39.51■■■■□ 3.92
CFTRP13569 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CFTRP13569 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC39.51■■■■□ 3.92
CFTRP13569 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CFTRP13569 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CFTRP13569 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.91
CFTRP13569 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC39.51■■■■□ 3.91
CFTRP13569 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC39.51■■■■□ 3.91
CFTRP13569 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC39.51■■■■□ 3.91
CFTRP13569 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC39.5■■■■□ 3.91
CFTRP13569 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CFTRP13569 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC39.5■■■■□ 3.91
CFTRP13569 USF2-207ENST00000595068 1612 ntTSL 5 BASIC39.5■■■■□ 3.91
CFTRP13569 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CFTRP13569 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
CFTRP13569 AC006015.1-201ENST00000429970 570 ntBASIC39.49■■■■□ 3.91
CFTRP13569 GXYLT1P2-201ENST00000433312 1230 ntBASIC39.49■■■■□ 3.91
CFTRP13569 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
CFTRP13569 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC39.49■■■■□ 3.91
CFTRP13569 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
CFTRP13569 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms