Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ALDH1A3-203ENST00000557963 1670 ntBASIC19.82■□□□□ 0.76
UBCP0CG48 KRT18P60-201ENST00000312876 1297 ntBASIC19.82■□□□□ 0.76
UBCP0CG48 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.82■□□□□ 0.76
UBCP0CG48 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.82■□□□□ 0.76
UBCP0CG48 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBCP0CG48 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBCP0CG48 AC131274.2-201ENST00000580697 1507 ntBASIC19.81■□□□□ 0.76
UBCP0CG48 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBCP0CG48 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
UBCP0CG48 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBCP0CG48 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
UBCP0CG48 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.8■□□□□ 0.76
UBCP0CG48 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
UBCP0CG48 AC139795.1-202ENST00000500444 432 ntBASIC19.8■□□□□ 0.76
UBCP0CG48 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.8■□□□□ 0.76
UBCP0CG48 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.8■□□□□ 0.76
UBCP0CG48 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBCP0CG48 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
UBCP0CG48 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
UBCP0CG48 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.8■□□□□ 0.76
UBCP0CG48 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.79■□□□□ 0.76
UBCP0CG48 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBCP0CG48 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBCP0CG48 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.78■□□□□ 0.76
UBCP0CG48 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.78■□□□□ 0.76
UBCP0CG48 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBCP0CG48 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBCP0CG48 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
UBCP0CG48 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBCP0CG48 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.77■□□□□ 0.76
UBCP0CG48 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBCP0CG48 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.77■□□□□ 0.76
UBCP0CG48 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.77■□□□□ 0.76
UBCP0CG48 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBCP0CG48 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.77■□□□□ 0.76
UBCP0CG48 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.77■□□□□ 0.75
UBCP0CG48 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBCP0CG48 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
UBCP0CG48 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBCP0CG48 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 AL117328.2-201ENST00000624617 1940 ntBASIC19.76■□□□□ 0.75
UBCP0CG48 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBCP0CG48 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.76■□□□□ 0.75
UBCP0CG48 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.76■□□□□ 0.75
UBCP0CG48 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
UBCP0CG48 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.76■□□□□ 0.75
UBCP0CG48 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.76■□□□□ 0.75
UBCP0CG48 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBCP0CG48 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.75■□□□□ 0.75
UBCP0CG48 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.75■□□□□ 0.75
UBCP0CG48 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBCP0CG48 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms