Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.58■■□□□ 1.37
CD48P09326 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD48P09326 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CD48P09326 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.57■■□□□ 1.36
CD48P09326 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.57■■□□□ 1.36
CD48P09326 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.57■■□□□ 1.36
CD48P09326 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD48P09326 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.57■■□□□ 1.36
CD48P09326 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CD48P09326 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.56■■□□□ 1.36
CD48P09326 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.56■■□□□ 1.36
CD48P09326 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD48P09326 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CD48P09326 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.55■■□□□ 1.36
CD48P09326 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.55■■□□□ 1.36
CD48P09326 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD48P09326 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CD48P09326 AC068473.5-201ENST00000616428 2072 ntBASIC23.55■■□□□ 1.36
CD48P09326 AC021242.3-201ENST00000607598 1377 ntBASIC23.54■■□□□ 1.36
CD48P09326 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD48P09326 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.54■■□□□ 1.36
CD48P09326 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CD48P09326 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD48P09326 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.54■■□□□ 1.36
CD48P09326 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.54■■□□□ 1.36
CD48P09326 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.54■■□□□ 1.36
CD48P09326 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.54■■□□□ 1.36
CD48P09326 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CD48P09326 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.53■■□□□ 1.36
CD48P09326 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CD48P09326 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CD48P09326 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CD48P09326 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CD48P09326 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.52■■□□□ 1.36
CD48P09326 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CD48P09326 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.52■■□□□ 1.36
CD48P09326 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.52■■□□□ 1.36
CD48P09326 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CD48P09326 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CD48P09326 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CD48P09326 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CD48P09326 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CD48P09326 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CD48P09326 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.51■■□□□ 1.35
CD48P09326 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CD48P09326 AC092068.2-201ENST00000590491 1708 ntBASIC23.51■■□□□ 1.35
CD48P09326 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.51■■□□□ 1.35
CD48P09326 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.51■■□□□ 1.35
CD48P09326 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.51■■□□□ 1.35
CD48P09326 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CD48P09326 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CD48P09326 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CD48P09326 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.5■■□□□ 1.35
CD48P09326 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.5■■□□□ 1.35
CD48P09326 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.5■■□□□ 1.35
CD48P09326 AL451085.2-201ENST00000605085 799 ntBASIC23.5■■□□□ 1.35
CD48P09326 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.5■■□□□ 1.35
CD48P09326 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.5■■□□□ 1.35
CD48P09326 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.5■■□□□ 1.35
CD48P09326 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.5■■□□□ 1.35
CD48P09326 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CD48P09326 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CD48P09326 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CD48P09326 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CD48P09326 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CD48P09326 BX664725.1-201ENST00000438252 379 ntBASIC23.49■■□□□ 1.35
CD48P09326 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.49■■□□□ 1.35
CD48P09326 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.49■■□□□ 1.35
CD48P09326 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CD48P09326 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CD48P09326 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.49■■□□□ 1.35
CD48P09326 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CD48P09326 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CD48P09326 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CD48P09326 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CD48P09326 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CD48P09326 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CD48P09326 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CD48P09326 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms