Protein–RNA interactions for Protein: P08047

SP1, Transcription factor Sp1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP1P08047 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.69■□□□□ 0.9
SP1P08047 AC011298.3-201ENST00000615796 283 ntBASIC20.69■□□□□ 0.9
SP1P08047 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP1P08047 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SP1P08047 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SP1P08047 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.68■□□□□ 0.9
SP1P08047 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP1P08047 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP1P08047 AC138932.3-201ENST00000567634 1902 ntBASIC20.67■□□□□ 0.9
SP1P08047 MIR939-201ENST00000401314 82 ntBASIC20.67■□□□□ 0.9
SP1P08047 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.67■□□□□ 0.9
SP1P08047 AP001330.3-201ENST00000520123 633 ntBASIC20.67■□□□□ 0.9
SP1P08047 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.67■□□□□ 0.9
SP1P08047 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.67■□□□□ 0.9
SP1P08047 AC009086.3-201ENST00000623486 1008 ntBASIC20.67■□□□□ 0.9
SP1P08047 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.67■□□□□ 0.9
SP1P08047 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP1P08047 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.67■□□□□ 0.9
SP1P08047 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP1P08047 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP1P08047 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.67■□□□□ 0.9
SP1P08047 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP1P08047 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP1P08047 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.66■□□□□ 0.9
SP1P08047 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP1P08047 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SP1P08047 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
SP1P08047 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP1P08047 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP1P08047 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.66■□□□□ 0.9
SP1P08047 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.65■□□□□ 0.9
SP1P08047 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.65■□□□□ 0.9
SP1P08047 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SP1P08047 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SP1P08047 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SP1P08047 AC006455.2-201ENST00000429931 906 ntBASIC20.65■□□□□ 0.9
SP1P08047 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SP1P08047 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
SP1P08047 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SP1P08047 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
SP1P08047 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.64■□□□□ 0.9
SP1P08047 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SP1P08047 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.64■□□□□ 0.89
SP1P08047 AC105265.2-201ENST00000467189 838 ntBASIC20.64■□□□□ 0.89
SP1P08047 AC091305.1-201ENST00000479476 895 ntBASIC20.64■□□□□ 0.89
SP1P08047 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.64■□□□□ 0.89
SP1P08047 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.64■□□□□ 0.89
SP1P08047 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.64■□□□□ 0.89
SP1P08047 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.64■□□□□ 0.89
SP1P08047 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.64■□□□□ 0.89
SP1P08047 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SP1P08047 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SP1P08047 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP1P08047 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP1P08047 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SP1P08047 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.63■□□□□ 0.89
SP1P08047 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP1P08047 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SP1P08047 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SP1P08047 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
SP1P08047 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SP1P08047 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.62■□□□□ 0.89
SP1P08047 MIR3181-201ENST00000578512 73 ntBASIC20.62■□□□□ 0.89
SP1P08047 AC136469.2-201ENST00000623944 1028 ntBASIC20.62■□□□□ 0.89
SP1P08047 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SP1P08047 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SP1P08047 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
SP1P08047 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.61■□□□□ 0.89
SP1P08047 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.61■□□□□ 0.89
SP1P08047 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.61■□□□□ 0.89
SP1P08047 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.61■□□□□ 0.89
SP1P08047 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SP1P08047 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SP1P08047 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SP1P08047 RASA4CP-201ENST00000424092 1398 ntBASIC20.6■□□□□ 0.89
SP1P08047 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SP1P08047 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SP1P08047 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms