Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL451085.2-201ENST00000605085 799 ntBASIC20.89■□□□□ 0.93
THBS1P07996 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THBS1P07996 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
THBS1P07996 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THBS1P07996 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
THBS1P07996 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THBS1P07996 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
THBS1P07996 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THBS1P07996 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
THBS1P07996 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
THBS1P07996 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
THBS1P07996 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.88■□□□□ 0.93
THBS1P07996 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THBS1P07996 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THBS1P07996 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.87■□□□□ 0.93
THBS1P07996 AC133561.1-201ENST00000568600 2415 ntBASIC20.87■□□□□ 0.93
THBS1P07996 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.87■□□□□ 0.93
THBS1P07996 AC137630.3-201ENST00000607245 391 ntBASIC20.87■□□□□ 0.93
THBS1P07996 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.87■□□□□ 0.93
THBS1P07996 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS1P07996 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.86■□□□□ 0.93
THBS1P07996 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.86■□□□□ 0.93
THBS1P07996 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.86■□□□□ 0.93
THBS1P07996 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
THBS1P07996 AL031848.2-201ENST00000607670 837 ntBASIC20.86■□□□□ 0.93
THBS1P07996 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.86■□□□□ 0.93
THBS1P07996 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS1P07996 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
THBS1P07996 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
THBS1P07996 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THBS1P07996 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THBS1P07996 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.85■□□□□ 0.93
THBS1P07996 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
THBS1P07996 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THBS1P07996 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
THBS1P07996 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.84■□□□□ 0.93
THBS1P07996 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.84■□□□□ 0.93
THBS1P07996 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
THBS1P07996 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THBS1P07996 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THBS1P07996 SNX5-217ENST00000606557 1087 ntBASIC20.84■□□□□ 0.93
THBS1P07996 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THBS1P07996 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
THBS1P07996 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
THBS1P07996 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THBS1P07996 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.83■□□□□ 0.93
THBS1P07996 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
THBS1P07996 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.83■□□□□ 0.93
THBS1P07996 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.83■□□□□ 0.92
THBS1P07996 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THBS1P07996 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THBS1P07996 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THBS1P07996 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
THBS1P07996 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THBS1P07996 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THBS1P07996 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.82■□□□□ 0.92
THBS1P07996 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
THBS1P07996 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THBS1P07996 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.82■□□□□ 0.92
THBS1P07996 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.82■□□□□ 0.92
THBS1P07996 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
THBS1P07996 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS1P07996 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS1P07996 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.81■□□□□ 0.92
THBS1P07996 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS1P07996 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.81■□□□□ 0.92
THBS1P07996 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.81■□□□□ 0.92
THBS1P07996 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.81■□□□□ 0.92
THBS1P07996 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS1P07996 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS1P07996 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.8■□□□□ 0.92
THBS1P07996 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
THBS1P07996 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.8■□□□□ 0.92
THBS1P07996 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THBS1P07996 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms