Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETP07949 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETP07949 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RETP07949 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETP07949 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.89■■□□□ 1.25
RETP07949 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.89■■□□□ 1.25
RETP07949 AC233992.3-201ENST00000607491 485 ntBASIC22.89■■□□□ 1.25
RETP07949 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RETP07949 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETP07949 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETP07949 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.88■■□□□ 1.25
RETP07949 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETP07949 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.88■■□□□ 1.25
RETP07949 YBX1P1-201ENST00000445822 960 ntBASIC22.88■■□□□ 1.25
RETP07949 AC136469.2-201ENST00000623944 1028 ntBASIC22.88■■□□□ 1.25
RETP07949 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RETP07949 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
RETP07949 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.88■■□□□ 1.25
RETP07949 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.88■■□□□ 1.25
RETP07949 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RETP07949 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RETP07949 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETP07949 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.87■■□□□ 1.25
RETP07949 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETP07949 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.87■■□□□ 1.25
RETP07949 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.87■■□□□ 1.25
RETP07949 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
RETP07949 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.87■■□□□ 1.25
RETP07949 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.87■■□□□ 1.25
RETP07949 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETP07949 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RETP07949 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.87■■□□□ 1.25
RETP07949 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETP07949 AC142381.3-201ENST00000568208 1670 ntBASIC22.87■■□□□ 1.25
RETP07949 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RETP07949 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RETP07949 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.86■■□□□ 1.25
RETP07949 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.86■■□□□ 1.25
RETP07949 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.86■■□□□ 1.25
RETP07949 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RETP07949 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.85■■□□□ 1.25
RETP07949 BX842568.3-201ENST00000418104 571 ntBASIC22.85■■□□□ 1.25
RETP07949 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.85■■□□□ 1.25
RETP07949 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.85■■□□□ 1.25
RETP07949 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.85■■□□□ 1.25
RETP07949 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
RETP07949 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RETP07949 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RETP07949 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.85■■□□□ 1.25
RETP07949 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
RETP07949 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RETP07949 AC004911.1-201ENST00000416316 871 ntBASIC22.84■■□□□ 1.25
RETP07949 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.84■■□□□ 1.25
RETP07949 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RETP07949 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.83■■□□□ 1.25
RETP07949 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.83■■□□□ 1.25
RETP07949 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.83■■□□□ 1.25
RETP07949 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.83■■□□□ 1.25
RETP07949 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.83■■□□□ 1.25
RETP07949 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.83■■□□□ 1.25
RETP07949 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.83■■□□□ 1.25
RETP07949 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RETP07949 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RETP07949 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
RETP07949 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
RETP07949 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.82■■□□□ 1.24
RETP07949 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.82■■□□□ 1.24
RETP07949 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.82■■□□□ 1.24
RETP07949 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RETP07949 AC241377.3-202ENST00000626088 1088 ntBASIC22.81■■□□□ 1.24
RETP07949 AC241585.3-202ENST00000628937 1088 ntBASIC22.81■■□□□ 1.24
RETP07949 AC245100.8-202ENST00000629247 1058 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms