Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDGFBP01127 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.18■■□□□ 1.3
PDGFBP01127 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDGFBP01127 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PDGFBP01127 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.17■■□□□ 1.3
PDGFBP01127 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDGFBP01127 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PDGFBP01127 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PDGFBP01127 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDGFBP01127 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.17■■□□□ 1.3
PDGFBP01127 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.17■■□□□ 1.3
PDGFBP01127 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.17■■□□□ 1.3
PDGFBP01127 ERN1-208ENST00000606895 2068 ntBASIC23.17■■□□□ 1.3
PDGFBP01127 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.16■■□□□ 1.3
PDGFBP01127 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFBP01127 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFBP01127 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFBP01127 AL355802.2-201ENST00000402069 882 ntBASIC23.16■■□□□ 1.3
PDGFBP01127 AC006015.1-201ENST00000429970 570 ntBASIC23.16■■□□□ 1.3
PDGFBP01127 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.16■■□□□ 1.3
PDGFBP01127 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.16■■□□□ 1.3
PDGFBP01127 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.16■■□□□ 1.3
PDGFBP01127 KRT18P61-201ENST00000585825 1298 ntBASIC23.16■■□□□ 1.3
PDGFBP01127 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFBP01127 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDGFBP01127 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PDGFBP01127 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PDGFBP01127 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PDGFBP01127 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.15■■□□□ 1.3
PDGFBP01127 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
PDGFBP01127 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.15■■□□□ 1.3
PDGFBP01127 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.15■■□□□ 1.3
PDGFBP01127 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDGFBP01127 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDGFBP01127 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDGFBP01127 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDGFBP01127 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.14■■□□□ 1.29
PDGFBP01127 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDGFBP01127 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.14■■□□□ 1.29
PDGFBP01127 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.13■■□□□ 1.29
PDGFBP01127 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PDGFBP01127 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.13■■□□□ 1.29
PDGFBP01127 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.13■■□□□ 1.29
PDGFBP01127 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDGFBP01127 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.12■■□□□ 1.29
PDGFBP01127 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PDGFBP01127 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDGFBP01127 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.12■■□□□ 1.29
PDGFBP01127 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.12■■□□□ 1.29
PDGFBP01127 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDGFBP01127 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.12■■□□□ 1.29
PDGFBP01127 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PDGFBP01127 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.12■■□□□ 1.29
PDGFBP01127 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.11■■□□□ 1.29
PDGFBP01127 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDGFBP01127 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PDGFBP01127 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PDGFBP01127 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDGFBP01127 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PDGFBP01127 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDGFBP01127 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.1■■□□□ 1.29
PDGFBP01127 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFBP01127 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFBP01127 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDGFBP01127 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
PDGFBP01127 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFBP01127 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFBP01127 AC026185.1-201ENST00000445748 174 ntBASIC23.09■■□□□ 1.29
PDGFBP01127 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFBP01127 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PDGFBP01127 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.09■■□□□ 1.29
PDGFBP01127 AL109923.1-201ENST00000618799 583 ntBASIC23.09■■□□□ 1.29
PDGFBP01127 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.09■■□□□ 1.29
PDGFBP01127 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFBP01127 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDGFBP01127 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.08■■□□□ 1.29
PDGFBP01127 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PDGFBP01127 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms