Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.29■■□□□ 1
CLPTM1O96005 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLPTM1O96005 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLPTM1O96005 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLPTM1O96005 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPTM1O96005 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.28■■□□□ 1
CLPTM1O96005 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.28■■□□□ 1
CLPTM1O96005 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CLPTM1O96005 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPTM1O96005 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLPTM1O96005 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.28■■□□□ 1
CLPTM1O96005 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLPTM1O96005 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLPTM1O96005 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.27■■□□□ 1
CLPTM1O96005 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CLPTM1O96005 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLPTM1O96005 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLPTM1O96005 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
CLPTM1O96005 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPTM1O96005 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLPTM1O96005 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CLPTM1O96005 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLPTM1O96005 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLPTM1O96005 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.25■□□□□ 0.99
CLPTM1O96005 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLPTM1O96005 RNF126P1-201ENST00000567452 1320 ntBASIC21.25■□□□□ 0.99
CLPTM1O96005 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLPTM1O96005 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 AC092296.2-201ENST00000589470 999 ntBASIC21.24■□□□□ 0.99
CLPTM1O96005 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLPTM1O96005 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.24■□□□□ 0.99
CLPTM1O96005 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLPTM1O96005 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLPTM1O96005 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.23■□□□□ 0.99
CLPTM1O96005 AL157400.5-201ENST00000507624 621 ntBASIC21.23■□□□□ 0.99
CLPTM1O96005 MIR6089-201ENST00000616698 64 ntBASIC21.23■□□□□ 0.99
CLPTM1O96005 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.23■□□□□ 0.99
CLPTM1O96005 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLPTM1O96005 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.23■□□□□ 0.99
CLPTM1O96005 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
CLPTM1O96005 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPTM1O96005 RARRES2P2-201ENST00000394842 485 ntBASIC21.22■□□□□ 0.99
CLPTM1O96005 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.22■□□□□ 0.99
CLPTM1O96005 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPTM1O96005 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPTM1O96005 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.22■□□□□ 0.99
CLPTM1O96005 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.22■□□□□ 0.99
CLPTM1O96005 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLPTM1O96005 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 ANOS2P-203ENST00000472227 1816 ntBASIC21.21■□□□□ 0.99
CLPTM1O96005 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CLPTM1O96005 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLPTM1O96005 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
CLPTM1O96005 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLPTM1O96005 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CLPTM1O96005 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLPTM1O96005 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLPTM1O96005 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLPTM1O96005 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms