Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.46■■□□□ 1.19
PCDHGA12O60330 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHGA12O60330 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA12O60330 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA12O60330 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGA12O60330 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA12O60330 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA12O60330 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA12O60330 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA12O60330 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA12O60330 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGA12O60330 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA12O60330 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGA12O60330 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA12O60330 AC087623.3-201ENST00000607047 1098 ntBASIC22.43■■□□□ 1.18
PCDHGA12O60330 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA12O60330 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA12O60330 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA12O60330 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA12O60330 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGA12O60330 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGA12O60330 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGA12O60330 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA12O60330 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA12O60330 AC009102.2-201ENST00000606772 1639 ntBASIC22.42■■□□□ 1.18
PCDHGA12O60330 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA12O60330 IRS3P-201ENST00000223076 1006 ntBASIC22.41■■□□□ 1.18
PCDHGA12O60330 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA12O60330 AL162430.1-201ENST00000480705 870 ntBASIC22.41■■□□□ 1.18
PCDHGA12O60330 AC241377.3-202ENST00000626088 1088 ntBASIC22.41■■□□□ 1.18
PCDHGA12O60330 AC241585.3-202ENST00000628937 1088 ntBASIC22.41■■□□□ 1.18
PCDHGA12O60330 AC245100.8-202ENST00000629247 1058 ntBASIC22.41■■□□□ 1.18
PCDHGA12O60330 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGA12O60330 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA12O60330 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGA12O60330 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA12O60330 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA12O60330 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA12O60330 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA12O60330 AC008764.7-201ENST00000593779 1081 ntBASIC22.4■■□□□ 1.18
PCDHGA12O60330 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA12O60330 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHGA12O60330 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA12O60330 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA12O60330 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDHGA12O60330 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA12O60330 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA12O60330 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA12O60330 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PCDHGA12O60330 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA12O60330 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 AC099791.1-201ENST00000416440 715 ntBASIC22.38■■□□□ 1.17
PCDHGA12O60330 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 AC136469.2-201ENST00000623944 1028 ntBASIC22.38■■□□□ 1.17
PCDHGA12O60330 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA12O60330 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA12O60330 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGA12O60330 C17orf82-201ENST00000623772 1530 ntBASIC22.37■■□□□ 1.17
PCDHGA12O60330 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA12O60330 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA12O60330 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA12O60330 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA12O60330 AL022069.1-201ENST00000568025 1636 ntBASIC22.36■■□□□ 1.17
PCDHGA12O60330 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA12O60330 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA12O60330 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms