Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PPM1DO15297 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPM1DO15297 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.12■■□□□ 1.13
PPM1DO15297 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPM1DO15297 AC024257.2-201ENST00000549699 147 ntBASIC22.12■■□□□ 1.13
PPM1DO15297 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PPM1DO15297 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PPM1DO15297 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PPM1DO15297 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.11■■□□□ 1.13
PPM1DO15297 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.11■■□□□ 1.13
PPM1DO15297 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPM1DO15297 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPM1DO15297 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.1■■□□□ 1.13
PPM1DO15297 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.1■■□□□ 1.13
PPM1DO15297 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
PPM1DO15297 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPM1DO15297 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPM1DO15297 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.1■■□□□ 1.13
PPM1DO15297 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PPM1DO15297 AL031432.3-201ENST00000607698 485 ntBASIC22.1■■□□□ 1.13
PPM1DO15297 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
PPM1DO15297 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.1■■□□□ 1.13
PPM1DO15297 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPM1DO15297 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.1■■□□□ 1.13
PPM1DO15297 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPM1DO15297 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPM1DO15297 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PPM1DO15297 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
PPM1DO15297 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.09■■□□□ 1.13
PPM1DO15297 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.09■■□□□ 1.13
PPM1DO15297 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.09■■□□□ 1.13
PPM1DO15297 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 DUX4L19-201ENST00000557448 1267 ntBASIC22.08■■□□□ 1.13
PPM1DO15297 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PPM1DO15297 AC099791.2-201ENST00000605725 427 ntBASIC22.08■■□□□ 1.13
PPM1DO15297 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPM1DO15297 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
PPM1DO15297 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPM1DO15297 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPM1DO15297 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PPM1DO15297 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.07■■□□□ 1.12
PPM1DO15297 SUDS3P1-201ENST00000505831 966 ntBASIC22.07■■□□□ 1.12
PPM1DO15297 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.07■■□□□ 1.12
PPM1DO15297 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.07■■□□□ 1.12
PPM1DO15297 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPM1DO15297 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.06■■□□□ 1.12
PPM1DO15297 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 AC142381.2-201ENST00000566120 298 ntBASIC22.06■■□□□ 1.12
PPM1DO15297 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.06■■□□□ 1.12
PPM1DO15297 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.06■■□□□ 1.12
PPM1DO15297 SYT6-210ENST00000641643 1587 ntBASIC22.06■■□□□ 1.12
PPM1DO15297 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PPM1DO15297 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PPM1DO15297 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPM1DO15297 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PPM1DO15297 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPM1DO15297 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPM1DO15297 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPM1DO15297 AC092171.4-201ENST00000609130 632 ntBASIC22.05■■□□□ 1.12
PPM1DO15297 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.05■■□□□ 1.12
PPM1DO15297 AC093323.1-202ENST00000635031 2045 ntBASIC22.05■■□□□ 1.12
PPM1DO15297 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PPM1DO15297 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPM1DO15297 C17orf82-201ENST00000623772 1530 ntBASIC22.05■■□□□ 1.12
PPM1DO15297 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.05■■□□□ 1.12
PPM1DO15297 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.05■■□□□ 1.12
PPM1DO15297 ALDH1A3-203ENST00000557963 1670 ntBASIC22.04■■□□□ 1.12
PPM1DO15297 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.04■■□□□ 1.12
PPM1DO15297 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPM1DO15297 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPM1DO15297 EDA-201ENST00000338901 1233 ntBASIC22.04■■□□□ 1.12
PPM1DO15297 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.04■■□□□ 1.12
PPM1DO15297 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPM1DO15297 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPM1DO15297 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPM1DO15297 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.04■■□□□ 1.12
PPM1DO15297 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 SERBP1P1-201ENST00000396021 1160 ntBASIC22.03■■□□□ 1.12
PPM1DO15297 AL355001.2-201ENST00000620617 1191 ntBASIC22.03■■□□□ 1.12
PPM1DO15297 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms