Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 TSPY13P-201ENST00000338964 914 ntBASIC18.19■□□□□ 0.5
UPK2O00526 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK2O00526 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UPK2O00526 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.19■□□□□ 0.5
UPK2O00526 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UPK2O00526 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 AF131216.4-201ENST00000638924 1588 ntBASIC18.18■□□□□ 0.5
UPK2O00526 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK2O00526 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK2O00526 MIR4281-201ENST00000580852 62 ntBASIC18.18■□□□□ 0.5
UPK2O00526 AC010980.1-201ENST00000587192 1142 ntBASIC18.18■□□□□ 0.5
UPK2O00526 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK2O00526 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK2O00526 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK2O00526 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
UPK2O00526 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK2O00526 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
UPK2O00526 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK2O00526 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.17■□□□□ 0.5
UPK2O00526 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK2O00526 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UPK2O00526 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK2O00526 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK2O00526 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK2O00526 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.16■□□□□ 0.5
UPK2O00526 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UPK2O00526 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.16■□□□□ 0.5
UPK2O00526 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK2O00526 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UPK2O00526 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UPK2O00526 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK2O00526 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.14■□□□□ 0.5
UPK2O00526 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.14■□□□□ 0.49
UPK2O00526 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK2O00526 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.14■□□□□ 0.49
UPK2O00526 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.14■□□□□ 0.49
UPK2O00526 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK2O00526 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK2O00526 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.14■□□□□ 0.49
UPK2O00526 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
UPK2O00526 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.14■□□□□ 0.49
UPK2O00526 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK2O00526 AC079834.2-201ENST00000609776 1949 ntBASIC18.13■□□□□ 0.49
UPK2O00526 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UPK2O00526 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK2O00526 AC004448.1-201ENST00000458332 883 ntBASIC18.13■□□□□ 0.49
UPK2O00526 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK2O00526 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK2O00526 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UPK2O00526 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK2O00526 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK2O00526 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPK2O00526 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK2O00526 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms