Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTCAO00442 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTCAO00442 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTCAO00442 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTCAO00442 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCAO00442 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RTCAO00442 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCAO00442 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCAO00442 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
RTCAO00442 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.64■■□□□ 1.05
RTCAO00442 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCAO00442 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTCAO00442 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTCAO00442 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.63■■□□□ 1.05
RTCAO00442 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.63■■□□□ 1.05
RTCAO00442 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.63■■□□□ 1.05
RTCAO00442 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTCAO00442 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RTCAO00442 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.62■■□□□ 1.05
RTCAO00442 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.62■■□□□ 1.05
RTCAO00442 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.62■■□□□ 1.05
RTCAO00442 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.62■■□□□ 1.05
RTCAO00442 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTCAO00442 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.62■■□□□ 1.05
RTCAO00442 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCAO00442 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCAO00442 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCAO00442 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCAO00442 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCAO00442 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCAO00442 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.61■■□□□ 1.05
RTCAO00442 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.61■■□□□ 1.05
RTCAO00442 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTCAO00442 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTCAO00442 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RTCAO00442 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.6■■□□□ 1.05
RTCAO00442 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.6■■□□□ 1.05
RTCAO00442 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.6■■□□□ 1.05
RTCAO00442 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCAO00442 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCAO00442 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RTCAO00442 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
RTCAO00442 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCAO00442 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTCAO00442 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTCAO00442 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RTCAO00442 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.59■■□□□ 1.05
RTCAO00442 UNC93B8-201ENST00000511903 705 ntBASIC21.59■■□□□ 1.05
RTCAO00442 MTDHP2-201ENST00000601468 714 ntBASIC21.59■■□□□ 1.05
RTCAO00442 MIR6722-201ENST00000617286 78 ntBASIC21.59■■□□□ 1.05
RTCAO00442 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCAO00442 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTCAO00442 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.58■■□□□ 1.05
RTCAO00442 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCAO00442 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.58■■□□□ 1.05
RTCAO00442 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCAO00442 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.58■■□□□ 1.04
RTCAO00442 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTCAO00442 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTCAO00442 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTCAO00442 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.04
RTCAO00442 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCAO00442 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCAO00442 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTCAO00442 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.56■■□□□ 1.04
RTCAO00442 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCAO00442 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.56■■□□□ 1.04
RTCAO00442 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.56■■□□□ 1.04
RTCAO00442 AC010997.5-201ENST00000609182 354 ntBASIC21.56■■□□□ 1.04
RTCAO00442 ANOS2P-203ENST00000472227 1816 ntBASIC21.56■■□□□ 1.04
RTCAO00442 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCAO00442 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCAO00442 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTCAO00442 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.55■■□□□ 1.04
RTCAO00442 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCAO00442 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms