Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM1O00151 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM1O00151 RAP2CP1-202ENST00000605179 643 ntBASIC21.49■■□□□ 1.03
PDLIM1O00151 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM1O00151 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PDLIM1O00151 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM1O00151 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PDLIM1O00151 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.49■■□□□ 1.03
PDLIM1O00151 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
PDLIM1O00151 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDLIM1O00151 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.48■■□□□ 1.03
PDLIM1O00151 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDLIM1O00151 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.48■■□□□ 1.03
PDLIM1O00151 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.48■■□□□ 1.03
PDLIM1O00151 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDLIM1O00151 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM1O00151 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM1O00151 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.47■■□□□ 1.03
PDLIM1O00151 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM1O00151 ANOS2P-203ENST00000472227 1816 ntBASIC21.47■■□□□ 1.03
PDLIM1O00151 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM1O00151 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM1O00151 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM1O00151 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM1O00151 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM1O00151 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.46■■□□□ 1.03
PDLIM1O00151 AC133552.2-201ENST00000619106 1032 ntBASIC21.46■■□□□ 1.03
PDLIM1O00151 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM1O00151 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM1O00151 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM1O00151 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PDLIM1O00151 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDLIM1O00151 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM1O00151 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 LINC00526-201ENST00000581067 1875 ntBASIC21.45■■□□□ 1.02
PDLIM1O00151 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
PDLIM1O00151 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM1O00151 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PDLIM1O00151 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM1O00151 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 AC127496.7-201ENST00000625110 1798 ntBASIC21.44■■□□□ 1.02
PDLIM1O00151 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.44■■□□□ 1.02
PDLIM1O00151 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PDLIM1O00151 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM1O00151 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PDLIM1O00151 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PDLIM1O00151 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM1O00151 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.43■■□□□ 1.02
PDLIM1O00151 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
PDLIM1O00151 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.43■■□□□ 1.02
PDLIM1O00151 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDLIM1O00151 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM1O00151 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
PDLIM1O00151 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM1O00151 KRT18P60-201ENST00000312876 1297 ntBASIC21.42■■□□□ 1.02
PDLIM1O00151 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PDLIM1O00151 GUSBP5-202ENST00000510805 1989 ntBASIC21.42■■□□□ 1.02
PDLIM1O00151 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PDLIM1O00151 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM1O00151 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.41■■□□□ 1.02
PDLIM1O00151 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM1O00151 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PDLIM1O00151 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDLIM1O00151 AL592293.1-201ENST00000502889 1188 ntBASIC21.41■■□□□ 1.02
PDLIM1O00151 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM1O00151 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
PDLIM1O00151 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
PDLIM1O00151 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM1O00151 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.4■■□□□ 1.02
PDLIM1O00151 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.4■■□□□ 1.02
PDLIM1O00151 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM1O00151 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms