Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H3BM21 AC141586.4-201ENST00000624558 1573 ntBASIC22.57■■□□□ 1.2
H3BM21 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
H3BM21 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
H3BM21 AC135279.3-201ENST00000610945 1311 ntBASIC22.57■■□□□ 1.2
H3BM21 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 AC142381.2-201ENST00000566120 298 ntBASIC22.56■■□□□ 1.2
H3BM21 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
H3BM21 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
H3BM21 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.55■■□□□ 1.2
H3BM21 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
H3BM21 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.55■■□□□ 1.2
H3BM21 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H3BM21 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
H3BM21 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.55■■□□□ 1.2
H3BM21 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H3BM21 AL161729.1-201ENST00000604104 1402 ntBASIC22.55■■□□□ 1.2
H3BM21 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H3BM21 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
H3BM21 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.55■■□□□ 1.2
H3BM21 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
H3BM21 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H3BM21 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
H3BM21 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
H3BM21 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.54■■□□□ 1.2
H3BM21 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.54■■□□□ 1.2
H3BM21 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.54■■□□□ 1.2
H3BM21 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.54■■□□□ 1.2
H3BM21 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
H3BM21 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.53■■□□□ 1.2
H3BM21 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
H3BM21 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
H3BM21 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.53■■□□□ 1.2
H3BM21 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
H3BM21 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.53■■□□□ 1.2
H3BM21 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
H3BM21 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.53■■□□□ 1.2
H3BM21 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H3BM21 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H3BM21 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.52■■□□□ 1.2
H3BM21 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
H3BM21 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.51■■□□□ 1.19
H3BM21 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 EDA-201ENST00000338901 1233 ntBASIC22.51■■□□□ 1.19
H3BM21 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
H3BM21 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H3BM21 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.5■■□□□ 1.19
H3BM21 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.5■■□□□ 1.19
H3BM21 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
H3BM21 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 AC024257.2-201ENST00000549699 147 ntBASIC22.5■■□□□ 1.19
H3BM21 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H3BM21 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.49■■□□□ 1.19
H3BM21 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
H3BM21 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.49■■□□□ 1.19
H3BM21 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.49■■□□□ 1.19
H3BM21 SYT6-210ENST00000641643 1587 ntBASIC22.49■■□□□ 1.19
H3BM21 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.49■■□□□ 1.19
H3BM21 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H3BM21 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.49■■□□□ 1.19
H3BM21 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
H3BM21 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
H3BM21 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
H3BM21 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
H3BM21 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.48■■□□□ 1.19
H3BM21 AL355001.2-201ENST00000620617 1191 ntBASIC22.48■■□□□ 1.19
H3BM21 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.48■■□□□ 1.19
H3BM21 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
H3BM21 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
H3BM21 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.47■■□□□ 1.19
H3BM21 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
H3BM21 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms