Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSGN1A6NI15 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MSGN1A6NI15 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 DUSP8P3-201ENST00000399571 1760 ntBASIC18.77■□□□□ 0.6
MSGN1A6NI15 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSGN1A6NI15 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MSGN1A6NI15 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MSGN1A6NI15 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
MSGN1A6NI15 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.75■□□□□ 0.59
MSGN1A6NI15 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MSGN1A6NI15 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.74■□□□□ 0.59
MSGN1A6NI15 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
MSGN1A6NI15 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
MSGN1A6NI15 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MSGN1A6NI15 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MSGN1A6NI15 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSGN1A6NI15 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 FOXO3B-201ENST00000395675 1928 ntBASIC18.73■□□□□ 0.59
MSGN1A6NI15 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 SPCS2P3-201ENST00000500401 656 ntBASIC18.73■□□□□ 0.59
MSGN1A6NI15 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.73■□□□□ 0.59
MSGN1A6NI15 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSGN1A6NI15 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.73■□□□□ 0.59
MSGN1A6NI15 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.72■□□□□ 0.59
MSGN1A6NI15 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MSGN1A6NI15 ABHD17AP5-201ENST00000580133 923 ntBASIC18.72■□□□□ 0.59
MSGN1A6NI15 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MSGN1A6NI15 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSGN1A6NI15 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSGN1A6NI15 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.71■□□□□ 0.59
MSGN1A6NI15 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MSGN1A6NI15 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSGN1A6NI15 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSGN1A6NI15 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MSGN1A6NI15 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.71■□□□□ 0.59
MSGN1A6NI15 SLC25A24-204ENST00000569674 2357 ntBASIC18.71■□□□□ 0.59
MSGN1A6NI15 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSGN1A6NI15 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MSGN1A6NI15 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MSGN1A6NI15 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.7■□□□□ 0.58
MSGN1A6NI15 DUX4L9-201ENST00000449051 1259 ntBASIC18.7■□□□□ 0.58
MSGN1A6NI15 MIR6765-201ENST00000614092 87 ntBASIC18.7■□□□□ 0.58
MSGN1A6NI15 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MSGN1A6NI15 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MSGN1A6NI15 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSGN1A6NI15 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms