Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 AC239859.2-201ENST00000444165 318 ntBASIC21.28■■□□□ 1
PRAMEF25A6NGN4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF25A6NGN4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF25A6NGN4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.26■□□□□ 0.99
PRAMEF25A6NGN4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF25A6NGN4 AC021242.3-201ENST00000607598 1377 ntBASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF25A6NGN4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 MIR4787-201ENST00000607364 84 ntBASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 AC079834.2-201ENST00000609776 1949 ntBASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PRAMEF25A6NGN4 ANOS2P-203ENST00000472227 1816 ntBASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF25A6NGN4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF25A6NGN4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF25A6NGN4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF25A6NGN4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF25A6NGN4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 GUSBP5-201ENST00000418136 578 ntBASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF25A6NGN4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms