Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV25A0A0B4J276 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV25A0A0B4J276 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV25A0A0B4J276 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV25A0A0B4J276 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV25A0A0B4J276 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV25A0A0B4J276 AC008406.3-201ENST00000620001 1374 ntBASIC17.02■□□□□ 0.31
TRAV25A0A0B4J276 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV25A0A0B4J276 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 AC131281.2-201ENST00000520478 145 ntBASIC17■□□□□ 0.31
TRAV25A0A0B4J276 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 AL512631.2-201ENST00000604634 923 ntBASIC17■□□□□ 0.31
TRAV25A0A0B4J276 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV25A0A0B4J276 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 SRD5A1P1-201ENST00000442297 786 ntBASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 AC092171.4-201ENST00000609130 632 ntBASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 AC004812.2-201ENST00000611079 2094 ntBASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV25A0A0B4J276 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 AC009102.2-201ENST00000606772 1639 ntBASIC16.98■□□□□ 0.31
TRAV25A0A0B4J276 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV25A0A0B4J276 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms