Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AC004461.1-201ENST00000412461 403 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SDHAP3-202ENST00000515467 728 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TEX28P1-201ENST00000613479 1221 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TEX28P2-201ENST00000617764 1221 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 DRD5P1-201ENST00000456605 1438 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TPM4P1-201ENST00000436100 807 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CEND1P1-201ENST00000451006 455 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AC026434.2-201ENST00000506094 1078 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AC009093.7-201ENST00000623853 1223 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AGAP12P-201ENST00000585227 2359 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms