Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 UROS-201ENST00000368774 744 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AC092570.1-201ENST00000414446 469 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AL080243.1-201ENST00000423293 1060 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 RN7SL128P-201ENST00000467883 305 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 RN7SL147P-201ENST00000487345 298 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 HNRNPA1P56-201ENST00000505767 954 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AC087203.1-201ENST00000532111 1181 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 KNOP1P1-201ENST00000542108 989 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 HNRNPA1P5-201ENST00000558213 966 ntBASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 RARS-210ENST00000626454 177 ntTSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.36■□□□□ 0.69
PHF8Q9UPP1 AC092903.1-201ENST00000466506 262 ntBASIC19.36■□□□□ 0.69
PHF8Q9UPP1 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 MIR6074-201ENST00000612054 107 ntBASIC19.36■□□□□ 0.69
PHF8Q9UPP1 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHF8Q9UPP1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.35■□□□□ 0.69
PHF8Q9UPP1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 OR10N1P-201ENST00000392758 869 ntBASIC19.35■□□□□ 0.69
PHF8Q9UPP1 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 AC005274.1-201ENST00000623460 802 ntBASIC19.35■□□□□ 0.69
PHF8Q9UPP1 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 AJ011931.1-201ENST00000618749 2492 ntBASIC19.35■□□□□ 0.69
PHF8Q9UPP1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PHF8Q9UPP1 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms