Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 AC068587.8-201ENST00000641239 219 ntBASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA1Q9UND3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.46□□□□□ -0.26
NPIPA1Q9UND3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC008132.1-202ENST00000342005 1389 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AL138725.1-201ENST00000407347 1314 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC010141.1-201ENST00000411585 623 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC012618.1-201ENST00000461223 412 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC005324.6-201ENST00000587972 613 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC008805.1-201ENST00000590892 364 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC023908.3-201ENST00000564211 3047 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC005912.2-201ENST00000619492 2400 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA1Q9UND3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 AL136379.1-201ENST00000623471 2642 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 AL157791.1-201ENST00000553667 1699 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 KRT8P19-201ENST00000551916 1455 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms