Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC013553.1-201ENST00000560906 267 ntBASIC20.63■□□□□ 0.89
STAG3Q9UJ98 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 SNORD3B-1-201ENST00000577988 758 ntBASIC20.63■□□□□ 0.89
STAG3Q9UJ98 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 AP005264.5-201ENST00000590066 467 ntBASIC20.63■□□□□ 0.89
STAG3Q9UJ98 RPS5-204ENST00000598098 536 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.63■□□□□ 0.89
STAG3Q9UJ98 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
STAG3Q9UJ98 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 AP000354.1-201ENST00000396982 456 ntBASIC20.62■□□□□ 0.89
STAG3Q9UJ98 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ALG1L3P-201ENST00000503331 765 ntBASIC20.62■□□□□ 0.89
STAG3Q9UJ98 IGHV1-12-201ENST00000518307 205 ntBASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CYP4F36P-201ENST00000589193 186 ntBASIC20.62■□□□□ 0.89
STAG3Q9UJ98 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 MME-218ENST00000625667 363 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG3Q9UJ98 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 PCDHA3-202ENST00000532566 4594 ntBASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AL109809.1-201ENST00000418979 1367 ntBASIC20.61■□□□□ 0.89
STAG3Q9UJ98 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AL035696.2-201ENST00000407941 709 ntBASIC20.61■□□□□ 0.89
STAG3Q9UJ98 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC009948.4-201ENST00000604692 675 ntBASIC20.61■□□□□ 0.89
STAG3Q9UJ98 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
STAG3Q9UJ98 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms