Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX1-2Q9UD57 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX1-2Q9UD57 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX1-2Q9UD57 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX1-2Q9UD57 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GAPDHP40-201ENST00000505218 1006 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 SLC25A39P2-201ENST00000537614 270 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC025048.3-201ENST00000590609 569 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC009955.4-201ENST00000597192 544 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC000095.1-201ENST00000603208 874 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC006538.3-201ENST00000612495 578 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AC005702.4-201ENST00000618393 416 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 LINC00628-201ENST00000628516 1289 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AL031432.4-201ENST00000641729 2190 ntBASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX1-2Q9UD57 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX1-2Q9UD57 AC138761.1-201ENST00000584393 385 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms