Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AL512306.1-201ENST00000432698 848 ntBASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 HERC2P11-201ENST00000562845 725 ntBASIC15.04■□□□□ -0
DNMT3BQ9UBC3 AC100756.2-201ENST00000569537 736 ntBASIC15.04■□□□□ -0
DNMT3BQ9UBC3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
DNMT3BQ9UBC3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AC092638.2-201ENST00000441105 947 ntBASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AC004837.1-201ENST00000446267 564 ntBASIC15.03■□□□□ -0
DNMT3BQ9UBC3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 RNA5SP417-201ENST00000516459 108 ntBASIC15.03■□□□□ -0
DNMT3BQ9UBC3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 AL354702.1-201ENST00000442006 1960 ntBASIC15.03■□□□□ -0
DNMT3BQ9UBC3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
DNMT3BQ9UBC3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 LAP3P2-201ENST00000454686 1454 ntBASIC15.02■□□□□ -0
DNMT3BQ9UBC3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 LINC01815-202ENST00000641468 1409 ntBASIC15.02■□□□□ -0
DNMT3BQ9UBC3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.02■□□□□ -0
DNMT3BQ9UBC3 AC005586.2-201ENST00000563946 837 ntBASIC15.02■□□□□ -0
DNMT3BQ9UBC3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms