Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC004898.1-201ENST00000451057 766 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AL035414.1-201ENST00000451327 857 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC104306.2-201ENST00000451877 341 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 UPF3AP2-201ENST00000457924 1132 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC091804.1-201ENST00000486888 567 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC100827.2-201ENST00000563214 1194 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC005695.3-201ENST00000614522 232 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AL162426.1-201ENST00000624141 743 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 LINC01230-201ENST00000625222 3017 ntBASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CUEDC1Q9NWM3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 AL645933.1-201ENST00000440087 609 ntBASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 MIR6720-201ENST00000611664 98 ntBASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 AC022726.2-201ENST00000634673 547 ntBASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.11□□□□□ -0.15
CUEDC1Q9NWM3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms