Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 FAM86MP-201ENST00000340703 885 ntBASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 NUTM2HP-201ENST00000442076 2498 ntBASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AC104989.1-201ENST00000519711 778 ntBASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 BTNL10-201ENST00000595971 695 ntBASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM55Q9BYV6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RN7SL832P-201ENST00000607781 1756 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 TOMM22P5-201ENST00000416399 439 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RPL13P2-201ENST00000440687 659 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RN7SL371P-201ENST00000578099 267 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AL391069.4-201ENST00000609583 481 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AL158212.4-201ENST00000624062 1286 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 AL137783.1-201ENST00000623494 1896 ntBASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM55Q9BYV6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM55Q9BYV6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM55Q9BYV6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM55Q9BYV6 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRIM55Q9BYV6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM55Q9BYV6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms