Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 ACTBP7-201ENST00000418351 1124 ntBASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 AC025186.1-201ENST00000478174 870 ntBASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTFDC1Q9BY42 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 RPL13AP3-202ENST00000494676 1473 ntBASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AC083801.1-201ENST00000491689 358 ntBASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 KRT18P37-201ENST00000520711 1282 ntBASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 VENTXP3-201ENST00000546480 773 ntBASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AL132994.1-201ENST00000554098 400 ntBASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTFDC1Q9BY42 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 OR7E115P-201ENST00000382617 1024 ntBASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 ALG1L3P-201ENST00000503331 765 ntBASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AC068831.5-201ENST00000557387 328 ntBASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 AL139339.2-201ENST00000608063 657 ntBASIC17.31■□□□□ 0.36
RTFDC1Q9BY42 MIR6074-201ENST00000612054 107 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms