Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 LINC00554-201ENST00000564841 3011 ntBASIC18.48■□□□□ 0.55
ABCA3Q99758 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
ABCA3Q99758 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 TUBB2BP1-201ENST00000404155 871 ntBASIC18.48■□□□□ 0.55
ABCA3Q99758 AL121994.1-201ENST00000413189 402 ntBASIC18.48■□□□□ 0.55
ABCA3Q99758 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 PEBP1P3-201ENST00000455475 548 ntBASIC18.48■□□□□ 0.55
ABCA3Q99758 NDUFB2P1-201ENST00000506966 295 ntBASIC18.48■□□□□ 0.55
ABCA3Q99758 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCA3Q99758 HCG18-241ENST00000602290 821 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCA3Q99758 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCA3Q99758 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA3Q99758 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ABCA3Q99758 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ABCA3Q99758 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA3Q99758 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ABCA3Q99758 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA3Q99758 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCA3Q99758 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCA3Q99758 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA3Q99758 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA3Q99758 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA3Q99758 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCA3Q99758 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ABCA3Q99758 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 CICP6-201ENST00000457191 2729 ntBASIC18.47■□□□□ 0.55
ABCA3Q99758 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCA3Q99758 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCA3Q99758 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA3Q99758 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 WDR54-202ENST00000409791 854 ntTSL 3 BASIC18.46■□□□□ 0.55
ABCA3Q99758 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ABCA3Q99758 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC18.46■□□□□ 0.55
ABCA3Q99758 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 NRADDP-202ENST00000641269 1585 ntBASIC18.46■□□□□ 0.55
ABCA3Q99758 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ABCA3Q99758 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCA3Q99758 RN7SL672P-201ENST00000474091 317 ntBASIC18.46■□□□□ 0.55
ABCA3Q99758 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCA3Q99758 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 CDC37P2-201ENST00000562287 1029 ntBASIC18.46■□□□□ 0.55
ABCA3Q99758 SNORA50D-202ENST00000627561 132 ntBASIC18.46■□□□□ 0.55
ABCA3Q99758 Z82244.2-201ENST00000632196 448 ntBASIC18.46■□□□□ 0.55
ABCA3Q99758 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA3Q99758 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA3Q99758 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.45■□□□□ 0.54
ABCA3Q99758 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ABCA3Q99758 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ABCA3Q99758 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.45■□□□□ 0.54
ABCA3Q99758 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms