Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC083801.1-201ENST00000491689 358 ntBASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC068831.5-201ENST00000557387 328 ntBASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 AC232323.1-201ENST00000540724 2099 ntBASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CRAMP1Q96RY5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 HLA-DPA2-205ENST00000433582 733 ntBASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 AC092862.1-201ENST00000541534 533 ntBASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 AC132825.4-202ENST00000578792 434 ntBASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 EIF5AP2-201ENST00000585668 1047 ntBASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.42■□□□□ 0.38
CRAMP1Q96RY5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AC105917.1-201ENST00000506637 2539 ntBASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 RPL3P2-204ENST00000413027 1203 ntBASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 ASS1P2-201ENST00000439895 1223 ntBASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AL139339.2-201ENST00000608063 657 ntBASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 AC018695.6-201ENST00000614011 534 ntBASIC17.41■□□□□ 0.38
CRAMP1Q96RY5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms