Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 U91328.1-201ENST00000437528 223 ntBASIC13.35□□□□□ -0.27
SNX18Q96RF0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 KRT18P25-201ENST00000508931 1278 ntBASIC13.35□□□□□ -0.27
SNX18Q96RF0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 MIR6074-201ENST00000612054 107 ntBASIC13.35□□□□□ -0.27
SNX18Q96RF0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 LRRC59-203ENST00000576448 1531 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC007274.1-201ENST00000439805 662 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 IGHV3-71-201ENST00000523324 359 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 HILS1-202ENST00000545329 423 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AP001063.1-201ENST00000568332 529 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 AC005252.2-201ENST00000624630 1141 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 SALL4P5-201ENST00000419001 1760 ntBASIC13.34□□□□□ -0.27
SNX18Q96RF0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
SNX18Q96RF0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNX18Q96RF0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SNX18Q96RF0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.33□□□□□ -0.27
SNX18Q96RF0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SNX18Q96RF0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.33□□□□□ -0.27
SNX18Q96RF0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
SNX18Q96RF0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms