Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 GPR53P-205ENST00000457298 1084 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AC006122.1-201ENST00000493323 440 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 MIR4741-201ENST00000579822 90 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 COX11-210ENST00000639671 696 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AHCYP4-201ENST00000419201 1315 ntBASIC14.15□□□□□ -0.15
PDLIM5Q96HC4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
PDLIM5Q96HC4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
PDLIM5Q96HC4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
PDLIM5Q96HC4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 HSPB1P2-201ENST00000448722 546 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AL512310.5-201ENST00000551999 515 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 KRT18P8-201ENST00000581937 1246 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC005962.1-201ENST00000584100 773 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AGAP10P-201ENST00000454844 2418 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 CCT8L1P-201ENST00000465400 1674 ntBASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.14□□□□□ -0.15
PDLIM5Q96HC4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDLIM5Q96HC4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms