Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCMH1Q96GD3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SCMH1Q96GD3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCMH1Q96GD3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCMH1Q96GD3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SCMH1Q96GD3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 KRT8P19-201ENST00000551916 1455 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AL356585.2-201ENST00000625078 2396 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 RN7SKP214-201ENST00000364208 315 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AL035414.1-201ENST00000451327 857 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 IMP3P2-201ENST00000489760 475 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC009779.1-201ENST00000551138 283 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC008805.1-201ENST00000590892 364 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AL157791.1-201ENST00000553667 1699 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC097359.2-201ENST00000604992 2389 ntBASIC13.49□□□□□ -0.25
SCMH1Q96GD3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SCMH1Q96GD3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC089987.1-201ENST00000551654 2209 ntBASIC13.48□□□□□ -0.25
SCMH1Q96GD3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AL157407.1-201ENST00000435784 904 ntBASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 RCC2P8-201ENST00000502779 1035 ntBASIC13.48□□□□□ -0.25
SCMH1Q96GD3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 RN7SL574P-201ENST00000581512 297 ntBASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC005962.1-201ENST00000584100 773 ntBASIC13.48□□□□□ -0.25
SCMH1Q96GD3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.48□□□□□ -0.25
SCMH1Q96GD3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms