Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AL590560.3-201ENST00000623350 461 ntBASIC13.87□□□□□ -0.19
NMD3Q96D46 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.87□□□□□ -0.19
NMD3Q96D46 AF228730.6-201ENST00000641497 218 ntBASIC13.87□□□□□ -0.19
NMD3Q96D46 AC084121.3-201ENST00000641716 218 ntBASIC13.87□□□□□ -0.19
NMD3Q96D46 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NMD3Q96D46 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.87□□□□□ -0.19
NMD3Q96D46 AC100757.3-201ENST00000622361 1406 ntBASIC13.87□□□□□ -0.19
NMD3Q96D46 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.87□□□□□ -0.19
NMD3Q96D46 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.87□□□□□ -0.19
NMD3Q96D46 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.87□□□□□ -0.19
NMD3Q96D46 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NMD3Q96D46 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NMD3Q96D46 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NMD3Q96D46 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NMD3Q96D46 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC072061.1-201ENST00000569710 2234 ntBASIC13.86□□□□□ -0.19
NMD3Q96D46 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NMD3Q96D46 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC009477.1-201ENST00000452936 217 ntBASIC13.86□□□□□ -0.19
NMD3Q96D46 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.86□□□□□ -0.19
NMD3Q96D46 DUX4L27-201ENST00000554796 1261 ntBASIC13.86□□□□□ -0.19
NMD3Q96D46 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
NMD3Q96D46 AL109936.8-201ENST00000641772 604 ntBASIC13.86□□□□□ -0.19
NMD3Q96D46 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NMD3Q96D46 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NMD3Q96D46 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.86□□□□□ -0.19
NMD3Q96D46 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.85□□□□□ -0.19
NMD3Q96D46 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NMD3Q96D46 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.85□□□□□ -0.19
NMD3Q96D46 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NMD3Q96D46 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NMD3Q96D46 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NMD3Q96D46 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NMD3Q96D46 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NMD3Q96D46 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms