Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF40Q8TER5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF40Q8TER5 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF40Q8TER5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 MIR181D-201ENST00000384853 137 ntBASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 AC113398.1-201ENST00000464124 406 ntBASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 RPL29P2-202ENST00000498671 657 ntBASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 PPY-202ENST00000587006 431 ntTSL 3 BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 AC005332.2-201ENST00000590010 930 ntBASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.64■□□□□ 0.9
ARHGEF40Q8TER5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 STK16-202ENST00000409260 1493 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 AC136621.1-201ENST00000624017 2304 ntBASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF40Q8TER5 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 PCTP-206ENST00000573500 919 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 MIR4326-201ENST00000582203 59 ntBASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AC011477.7-201ENST00000617163 1440 ntBASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 RBM14-205ENST00000443702 732 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AF186996.6-201ENST00000485294 149 ntBASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 NDUFB2P1-201ENST00000506966 295 ntBASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF40Q8TER5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AL354702.1-201ENST00000442006 1960 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AC097474.1-201ENST00000506481 1371 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AL031768.1-201ENST00000606542 701 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AC008622.3-201ENST00000621170 600 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 AC148476.1-201ENST00000622182 705 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 SFPQP1-201ENST00000446621 1786 ntBASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 DDC-204ENST00000426377 1700 ntTSL 3 BASIC20.62■□□□□ 0.89
ARHGEF40Q8TER5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF40Q8TER5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms