Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SGMS2Q8NHU3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.15□□□□□ -0.46
SGMS2Q8NHU3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
SGMS2Q8NHU3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SGMS2Q8NHU3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SGMS2Q8NHU3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL731571.1-201ENST00000617058 5428 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL138799.1-201ENST00000448213 1675 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ZBED1P1-201ENST00000502364 1930 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL645937.2-201ENST00000396808 931 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 RPSAP36-202ENST00000494591 1261 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AC097724.1-201ENST00000609581 426 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SGMS2Q8NHU3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 AL031595.1-201ENST00000623969 4709 ntBASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SGMS2Q8NHU3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms