Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 TUBBP5-203ENST00000508529 1334 ntBASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 CCT8L1P-201ENST00000465400 1674 ntBASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 BX284668.4-201ENST00000453917 508 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 MIR4525-201ENST00000580000 75 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 MIR3615-201ENST00000581999 87 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AC026740.1-201ENST00000607068 791 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AC138649.2-201ENST00000615886 705 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 GPR182-203ENST00000622922 591 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AC020907.1-201ENST00000616460 1350 ntBASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZIC4Q8N9L1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 CICP4-201ENST00000447359 2812 ntBASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 AC090643.2-201ENST00000623442 2029 ntBASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 RN7SKP214-201ENST00000364208 315 ntBASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZIC4Q8N9L1 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms